Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1106 ATGGCGAACAAAGAGTTCAAAATCCCGCCGGTATCTTTCCCCGCCGGAATCCCCGCCCCCAACCTCCCCCAGCGCCGCGTTCCAAACCCTCCCTTCCAACCTAACTCCAGCATCCCCTTTATGTCCTTCGATATCGGCTCCGCCGCAGCCTCCACCTCCTCCGGTCCAATCTACACCGGTCCAATCGGCGGCAGCGGTGGTGGCTCCGCCAACTTCGAGGACGAGGAGCCTCTCCTCGACGAGCTCGGTATCCACCCGGACCAAATCTGGAGCAAAATCCGTTCCGTATTGAACCCGTTTCGCGTGAACCACACGATCCACAAAGATTCCGATCTCTCAGGTCCGATCCTTCTGTATATGTCATTTTGTTTGTTTCAGTTACTCGCTGGGAAGATCCAATTCGGCGTTATATTAGGTTGGATCGTTGTTTCTTCGATCTTTTTATACGTTGTTTTCAACATGCTCGCTGGTCGAACCGGTAATCTTGATCTGCACACTTGTACTAGTGTGGTTGGTTACTGTATGTTGCCGGTTGTTATTTTTTCGGCTCTTTCGCTTTTCGTGCCGCAGGGTGGGGTTGTTGCAGTTGCTATTGCTGCTGTTTTTGTGCTGTGGTCGACTCGGGCTTCGACTGGGCTTATTGTGTCGCTGACTGATGGTGGGGATGAGCATCGCGGGTTGGTTGCGTATGCGTGTTTCTTGATTTACTCTCTCTTTTCGTTGCTTGTTGTGTTCTAA 738 0.5203 MANKEFKIPPVSFPAGIPAPNLPQRRVPNPPFQPNSSIPFMSFDIGSAAASTSSGPIYTGPIGGSGGGSANFEDEEPLLDELGIHPDQIWSKIRSVLNPFRVNHTIHKDSDLSGPILLYMSFCLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRTGNLDLHTCTSVVGYCMLPVVIFSALSLFVPQGGVVAVAIAAVFVLWSTRASTGLIVSLTDGGDEHRGLVAYACFLIYSLFSLLVVF* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1106 245 Pfam Yip1 domain 98 241 IPR006977 GO:0016020
Lan5g1106 245 PANTHER GOLGI MEMBRANE PROTEIN YIP1 4 245 IPR045231 GO:0006888
Lan5g1106 245 MobiDBLite consensus disorder prediction 1 22 - -
Lan5g1106 245 PANTHER PROTEIN YIPF 4 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1106 Lan-Chr5 24318130 24319150 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g1106 K20363 - gmx:100791279 404.445
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g1106 5 24318130 24319150 Lan5g1106 5 24318130 24319150 ECH
Lan9g0374 9 5591776 5593608 Lan5g1106 5 24318130 24319150 LSH