Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1105 ATGGCAAGAATGTCATTAGAACCTTTAATTGTAGGGAGAGTCATAGGAGATGTTCTTGATTCTTTTACCAGTACCATGAAAATGACTGTGAGTTACAATAACAAGCAAGTCTTCAATGGCCATGAACTCTTCCCTTCAACTATCACCAACAAGCCAAGGGTTGAGATTGATGGTGGTGATTTGAGGTCCTTCTTTACACTGGTTATGACAGACCCTGATGTTCCTGGCCCTAGTGATCCTTATCTGAGAGAGCATTTGCACTGGATGGTGACTGATATTCCAGGTACAACAGATGCCACATTTGGGAAAGACTTGGTGAGCTATGAGATTCCAAAGCCAAATATTGGGATCCATAGGTTTGTGTTTGTCTTGTTCAAGCAAAAAAGGAGGCAATGTGTTACTCAACCATCTTCAAGGGATCACTTCAATACTAAGAATTTTGCAGCAGAAAATGACCTTGGTCTTCCTGTTGCTGCTGTTTACTTCAATGCACAGAGAGAAACTGCTGCAAGAAGGCGCTAG 522 0.4195 MARMSLEPLIVGRVIGDVLDSFTSTMKMTVSYNNKQVFNGHELFPSTITNKPRVEIDGGDLRSFFTLVMTDPDVPGPSDPYLREHLHWMVTDIPGTTDATFGKDLVSYEIPKPNIGIHRFVFVLFKQKRRQCVTQPSSRDHFNTKNFAAENDLGLPVAAVYFNAQRETAARRR* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1105 173 ProSitePatterns Phosphatidylethanolamine-binding protein family signature. 65 87 IPR001858 -
Lan5g1105 173 Gene3D - 1 173 IPR036610 -
Lan5g1105 173 Pfam Phosphatidylethanolamine-binding protein 50 162 IPR008914 -
Lan5g1105 173 PANTHER PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN 3 172 IPR035810 -
Lan5g1105 173 PANTHER PROTEIN TERMINAL FLOWER 1 3 172 IPR031114 GO:0003712|GO:0009910
Lan5g1105 173 SUPERFAMILY PEBP-like 13 167 IPR036610 -
Lan5g1105 173 CDD PEBP_euk 26 164 IPR035810 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1105 Lan-Chr5 24312895 24315190 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g1105 K06910 - pvu:PHAVU_001G189200g 323.553
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g1105 5 24312895 24315190 Lan5g1105 5 24312895 24315190 ECH
Lan9g0373 9 5579582 5582433 Lan5g1105 5 24312895 24315190 LSH