Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1102 ATGAGTTTGGATACCATAAAAATGGCAACTTGTATGTCTACAAGTTTTGCTCCTTCAAATTCTAGACATTTAGCTAGGGTTCTTGCTGTTCCTGGAGGAAGGACATTGACAGAGAATCACAATGGCAGGTCATGTTTCATGAAAATGTATGAAAACAAGTATGGATTTTCGGGTGGTAACCGAAAATCGGGTTTGTTACAAGTTAAGTGCTCAGCCAATTCCAACAGTGTCTACCATGGTAAAGATCCTTTTCTAGATCTACATCCTGAGGTGTCAATGCTCAGAGGGACAGGTAGTGGTGGAGTGAACAACCTGATAAAAGATATCCCCAACGGAAATGTTGCTGAAAGCTTAGAACCCATTTCTAGTTCAAGTAATTACAATGAGGCAAAGATCAAAGTCATTGGTGTTGGAGGTGGTGGCTCAAATGCAGTCAATCGCATGATTCAGAGCTCCATGAATGGTGTAGAGTTCTGGATTGTCAACACCGATGTTCAAGCCATGAGAGTATCACCTGTCTTTCCGGATAACCGTTTGCAAATTGGTCAAGAGCTAACTCGAGGTCTTGGTGCTGGTGGTAATCCTGAGATTGGCATGAATGCTGCCAAAGAAAGCAGAGAATCAATTGAGGAAGCTGTTCATGGAGCTGATATGGTCTTTGTTACGGCTGGAATGGGTGGAGGAACTGGCACTGGTGGAGCTCCAATTATTGCTGCCGTTGCAAAGTCGATGGGTATTCTGACTGTTGGTATTGTCACAACCCCTTTCTCATTTGAAGGACGAAGGAGGGCAGTTCAAGCACAAGAAGGAATTGCAGCTTTAAGAGATAGTGTTGATACTCTGATAGTTATACCAAATGACAAGCTGCTGACAGCAGTTGCTCCATCTACTCCTGTAACCGAGGCATTCAATCTGGCTGATGATATTCTTCGACAAGGTGTTCGTGGCATATCTGATATCATTACGATACCGGGATTGGTGAATGTAGACTTTGCTGATGTTCGAGCTATAATGGCCGATGCAGGTTCTTCACTTATGGGGATAGGAACTGCAACTGGGAAAACAAGGGCAAGAGATGCTGCATTGAATGCCATCCAGTCACCTTTATTAGATATTGGTATCGAGAGGGCTACCGGAATTGTATGGAACATAACTGGTGGAAGCGATCTGACCTTGTTTGAGGTAAATGCTGCAGCAGAGGTTATATATGATCTTGTGGACCCCACTGCTAACTTAATATTTGGATCAGTAATAGATCCATCCCTAAATGGCCAAGTAAGCATAACATTGATTGCAACTGGATTCAAGCGCCAAGAGGAAAATGAAGTGAGACCTACACAGGCCACACAACTCACACAGGGAGAACCCATCGTTATCAATCGGCGATCTTCCTCTTTCACCGATGGCAGTTTTGTCGAGATCCCTGAATTCCTGAAGAAGAAAGGACGATCACGCTATCCAAGAGCTTAA 1470 0.4381 MSLDTIKMATCMSTSFAPSNSRHLARVLAVPGGRTLTENHNGRSCFMKMYENKYGFSGGNRKSGLLQVKCSANSNSVYHGKDPFLDLHPEVSMLRGTGSGGVNNLIKDIPNGNVAESLEPISSSSNYNEAKIKVIGVGGGGSNAVNRMIQSSMNGVEFWIVNTDVQAMRVSPVFPDNRLQIGQELTRGLGAGGNPEIGMNAAKESRESIEEAVHGADMVFVTAGMGGGTGTGGAPIIAAVAKSMGILTVGIVTTPFSFEGRRRAVQAQEGIAALRDSVDTLIVIPNDKLLTAVAPSTPVTEAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIMADAGSSLMGIGTATGKTRARDAALNAIQSPLLDIGIERATGIVWNITGGSDLTLFEVNAAAEVIYDLVDPTANLIFGSVIDPSLNGQVSITLIATGFKRQEENEVRPTQATQLTQGEPIVINRRSSSFTDGSFVEIPEFLKKKGRSRYPRA* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1102 489 SUPERFAMILY Tubulin nucleotide-binding domain-like 130 328 IPR036525 -
Lan5g1102 489 SMART Tubulin_C_4 327 444 IPR018316 -
Lan5g1102 489 ProSitePatterns FtsZ protein signature 2. 217 238 IPR020805 GO:0005525
Lan5g1102 489 Gene3D Tubulin/FtsZ, GTPase domain 121 339 IPR036525 -
Lan5g1102 489 PANTHER CELL DIVISION FTSZ-LIKE PROTEIN 8 487 - -
Lan5g1102 489 SMART Tubulin_4 131 325 IPR003008 GO:0005525
Lan5g1102 489 TIGRFAM ftsZ: cell division protein FtsZ 123 450 IPR000158 GO:0003924|GO:0005525
Lan5g1102 489 Pfam Tubulin/FtsZ family, GTPase domain 131 291 IPR003008 GO:0005525
Lan5g1102 489 Hamap Cell division protein FtsZ [ftsZ]. 127 482 IPR000158 GO:0003924|GO:0005525
Lan5g1102 489 SUPERFAMILY Tubulin C-terminal domain-like 324 438 IPR008280 -
Lan5g1102 489 Gene3D - 341 452 IPR037103 -
Lan5g1102 489 PRINTS Cell division protein FtsZ signature 218 238 IPR003008 GO:0005525
Lan5g1102 489 PRINTS Cell division protein FtsZ signature 246 267 IPR003008 GO:0005525
Lan5g1102 489 PRINTS Cell division protein FtsZ signature 309 331 IPR003008 GO:0005525
Lan5g1102 489 PRINTS Cell division protein FtsZ signature 332 353 IPR003008 GO:0005525
Lan5g1102 489 CDD FtsZ_type1 142 434 IPR000158 GO:0003924|GO:0005525
Lan5g1102 489 PANTHER CELL DIVISION PROTEIN FTSZ-RELATED 8 487 IPR045061 GO:0003924|GO:0005525
Lan5g1102 489 Pfam FtsZ family, C-terminal domain 342 436 IPR024757 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1102 Lan-Chr5 24289411 24294501 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g1102 K03531 - gmx:100793382 744.577
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g1102 5 24289411 24294501 Lan5g1102 5 24289411 24294501 ECH
Lan9g0371 9 5557051 5562450 Lan5g1102 5 24289411 24294501 LSH
Lan5g1102 5 24289411 24294501 Lan19g0381 19 4722465 4726958 LSH