Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1090 ATGTTTTCATCTAGCATTTTGCTACAGATTCTGGCCTGTGCAGTATACAACAATTGGTGGCCTATGTTATCAGCTCTCATGTATGTTATTGTGCCCATGCCGTGCTTATTCTTTGGAGGCGGATCTACTCAATTTCTGATGAGCCGTGATGGTGGTGGTTGGATAGATGCTGCAAAGTTTTTAACTGGAGCATCGTCCGTGGGGAGCATAGCGATTCCTATAATCCTTAAGCATGCTCATATGATTGAGACAGGAGCGATGCTCATTGAGCTTGTATCTTTCTTCATATTTATATGTACTGTTTTATGTTTCCACCAAGCGAGCCTTGATGATGATTGGTAA 342 0.4211 MFSSSILLQILACAVYNNWWPMLSALMYVIVPMPCLFFGGGSTQFLMSRDGGGWIDAAKFLTGASSVGSIAIPIILKHAHMIETGAMLIELVSFFIFICTVLCFHQASLDDDW* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1090 113 Pfam Vacuolar protein sorting 55 2 107 IPR007262 -
Lan5g1090 113 PANTHER RH04491P 1 112 - -
Lan5g1090 113 PANTHER LEPTIN RECEPTOR-RELATED 1 112 IPR007262 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1090 Lan-Chr5 24220864 24223258 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g1090 1 108 EF-hand Containing Proteins AT1G32410 54.955 1.04e-38 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g1090 - - gmx:100800586 230.335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g1090 5 24220864 24223258 Lan5g1090 5 24220864 24223258 ECH