Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1086 ATGGCAATTAGCATTCATTTTTCAATTATACTGTTTTCTTTATTTTCTATGCTACACTTTACCTTTACTTTTTCCCATACCATTCCACTACCAAGGTTTCCTTCTTCACTGGTTCATCCAGAGTTACAACTAAGTTCTGATTCTGCTGAAAAAAACCTTTACAAAACAAAGTTTTTCACCCAAATACTTGATCACTTCAATTATAATCCCCAGAGCTACCAAACTTTTCAGCAGAGATATCTTATCAATGATACATATTGGGGTGGTTTCAAGAACAAAGCTCCAATCTTTGTATACACAGGAAATGAGGGTGACATTGAATGGTTCACACAGAACACAGGCTTTATGTTTGAGAAAGCACCTCATTTCAAAGCACTTTTGGTTTTTATTGAGCATAGATTCTATGGAAAATCAATACCATTTGGTGGAAACAAGGAGATTGCATATGCAAATAGCAGCACACTTGGATATTTGAGTTCAACACAAGCATTGGCTGATTATGCCACTCTCATTATTGATCTCAAGAAGAATTTGTCAGCAAGTGACTCTCCAGTAGTGGTTTTTGGAGGATCCTATGGAGGAATGCTTGCAGCATGGTTTAGATTGAAGTATCCACATGTTGCTATTGGAGCTTTGGCATCCTCTGCTCCAATCCTCCATTTTATGGGTGTGACGTCACCATATGTCTTCAACAATATCATCACACAAGACTTCAGGGGTGTAAGTGAGAATTGTTACAAAGTGTTAAAGGGATCATGGAAGCTAATAGAGGACACATTTAACAAAAAAGGAGGACCTGAACTGTTACAAAAATCATTCAGAATATGCAATAATGAGTCTGATCCTGGTTCTCTGGAAGGTTGGCTTCAAACAGCGTGGGTTTATGCTGCAATGACAGATTATCCAACACCATCCAATTTTCTGAATCCAATGCCAGCCTATCCAGTTAGAGAGATGTGCAAGGCCATTGACAGCTCAAGAGGGAATAATAATAATACATTAGAGAAGTTGTATTATGCAGCAAATATCTACTACAACTACACTGGCAATGTTAAGTGTTTTGATTTAAACGAGGATTCAGATCCTCATGGTCTTCAAGAATGGCAGTGGCAGGCTTGTACCGAGATGATAATGCCCTTAGGTGGGAACAATGAGGAAAGCATATTCCCAGAATCCAAGTGGTCTTATGATGATAGATCTTCTTATTGCCAATATGCTTACAATTTAACTCCAAGACCCCATTGGATTACAACTGAGTTTGGTGGCCATGATATTAAGAAAGTTCTAAGAAGGTTTGCAAGCAACATTATCTTTTTTAATGGTTTAAGAGACCCTTGGAGCGGTGGAGGGGTGTTGAAGAATATATCAAAAACAATAGTTGCAATAGTTGCAAAAGAAGGAGCTCATCATGTAGACCTAAGGTTCTCAACTAAAGAAGACCCAAAGTGGCTTAAACGTATAAGGAAACAAGAGGTAAAGATCATAGCAAGGTGGATCAAACAATATCATGAAGACTTATAA 1521 0.3794 MAISIHFSIILFSLFSMLHFTFTFSHTIPLPRFPSSLVHPELQLSSDSAEKNLYKTKFFTQILDHFNYNPQSYQTFQQRYLINDTYWGGFKNKAPIFVYTGNEGDIEWFTQNTGFMFEKAPHFKALLVFIEHRFYGKSIPFGGNKEIAYANSSTLGYLSSTQALADYATLIIDLKKNLSASDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSAPILHFMGVTSPYVFNNIITQDFRGVSENCYKVLKGSWKLIEDTFNKKGGPELLQKSFRICNNESDPGSLEGWLQTAWVYAAMTDYPTPSNFLNPMPAYPVREMCKAIDSSRGNNNNTLEKLYYAANIYYNYTGNVKCFDLNEDSDPHGLQEWQWQACTEMIMPLGGNNEESIFPESKWSYDDRSSYCQYAYNLTPRPHWITTEFGGHDIKKVLRRFASNIIFFNGLRDPWSGGGVLKNISKTIVAIVAKEGAHHVDLRFSTKEDPKWLKRIRKQEVKIIARWIKQYHEDL* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1086 506 Gene3D alpha/beta hydrolase 58 499 IPR029058 -
Lan5g1086 506 Pfam Serine carboxypeptidase S28 61 489 IPR008758 GO:0006508|GO:0008236
Lan5g1086 506 Gene3D Serine carboxypeptidase S28, SKS domain 226 393 IPR042269 -
Lan5g1086 506 PANTHER LYSOSOMAL PRO-X CARBOXYPEPTIDASE-LIKE PROTEIN 2 506 - -
Lan5g1086 506 PANTHER PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED 2 506 - -
Lan5g1086 506 SUPERFAMILY alpha/beta-Hydrolases 125 473 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1086 Lan-Chr5 24158062 24163817 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g1086 K01285 - gmx:100803257 803.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g1086 5 24158062 24163817 Lan5g1086 5 24158062 24163817 ECH