Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1078 ATGGAACACAGAACAAGTTTTCCAATGACTTATCCTAACATTATTCTCTGTTTCCTCTGTCTCTTTTCATTCATTTCATCTTCTTCTTCTTCTTCTAACCCCAACACAATAACTCTTCCTCTTTCTCCTTTATTCACCAACCACCCTTCATCACCACCAGATCCATTCCAATCCCTCAAACTCGCCGCCTCTGCGTCTCTAACACGCGCCACCCACCTCAAACATAGCAACAAAACCAATCTCAACGACCCTTCAAATGTTACTACAGAAGTTCATTCCAAAAGCTATGGTGGTTACTCAATAGATCTTCAATTTGGAACACCAACTCAAACCTCGTCTTTTGTCTTAGACACTGGAAGTAGCCTTGTTTGGTTCCCATGTTCATCACGTTATACATGTTCATCTTGTTCCTTCTCAAATATTGATCCTACCACAATCCCTAAGTTCATTCCAAAAAACTCAACATCTTCGAAAATCGTTGGTTGTGCTAACCCAAAATGTGGTTGGATTTTTGGGTCTAACGTTGAATCTCGTTGCAATGGTTGCAACCCAAAGACTCAAAATTGTAGCTTTAATTGTCCTACCTATATAATTCAATATGGGTTGGGTTCAACCGCGGGTTTATTACTCTCGGAGAATCTCAATTTTCCGGCGAAAGTTGTGCCGGATTTTCTAGTTGGTTGTTCTCTTCTCTCGATTCGGCAACCTTCTGGGATTGCAGGTTTTGGACGCGGTTTAGAATCGCTTCCATCTCAAATGGGTTTGAAGAGATTTTCTTACTGTTTAGTTTCTCATAAATTCGATGACTCGCCGGAAAATAGTGACCTTGTTCTGCAGATAGGTTCCTCCGGCGATGGAAAAACCAGTGGGTTGAGCTACACACCGTTTCAGAAAAACCCTGAAGTAAATTCCGTGTTCAAAGAGTACTATTACGTGAGCCTTAAGAAAATCATGGTGGGTGGAAAGCGGGTCAAGATCCCGATCGGGTTGTTGGAACCGGGTTCTGACGGTAACGGTGGAACCATCGTGGATTCCGGTTCAACATTTACCTTTATGGAGAGACAAGTGTTTGAATTGGTGGCTCAAGAGTTTGAGAAACAAATAGGAAATAACACAAGGGCTAAGGATGTTGAAACTCAATCGGGTTTGAGTCCTTGTTTTACGGTTGATAACTCCGGCGGCAATGTCGATTTGCCTCAATTAACTTTCGGGTTTAGGGGTGGTGCTAAAATGGTATTGCCGGTGGCGAATTATTTCTCATTCGTCGACAGTGATAAAGTGGTTTGTTTGACGATTGTTTCCGATGGTGTTGTCGGTCCAGCGAGGGGTAGTGGTCCGGCGATCATCTTGGGGAACTATCAACAACAAAATTTCAATGTAGAATTTGATTTGGAAAATGAAAGGTTCGGATTCGGGCCTCGGACTTGCAATAAGAGTACTTAA 1443 0.4255 MEHRTSFPMTYPNIILCFLCLFSFISSSSSSSNPNTITLPLSPLFTNHPSSPPDPFQSLKLAASASLTRATHLKHSNKTNLNDPSNVTTEVHSKSYGGYSIDLQFGTPTQTSSFVLDTGSSLVWFPCSSRYTCSSCSFSNIDPTTIPKFIPKNSTSSKIVGCANPKCGWIFGSNVESRCNGCNPKTQNCSFNCPTYIIQYGLGSTAGLLLSENLNFPAKVVPDFLVGCSLLSIRQPSGIAGFGRGLESLPSQMGLKRFSYCLVSHKFDDSPENSDLVLQIGSSGDGKTSGLSYTPFQKNPEVNSVFKEYYYVSLKKIMVGGKRVKIPIGLLEPGSDGNGGTIVDSGSTFTFMERQVFELVAQEFEKQIGNNTRAKDVETQSGLSPCFTVDNSGGNVDLPQLTFGFRGGAKMVLPVANYFSFVDSDKVVCLTIVSDGVVGPARGSGPAIILGNYQQQNFNVEFDLENERFGFGPRTCNKST* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1078 480 Pfam Xylanase inhibitor N-terminal 99 271 IPR032861 -
Lan5g1078 480 Gene3D Acid Proteases 73 271 IPR021109 -
Lan5g1078 480 SUPERFAMILY Acid proteases 95 477 IPR021109 -
Lan5g1078 480 CDD pepsin_A_like_plant 98 476 IPR034161 -
Lan5g1078 480 Gene3D Acid Proteases 280 480 IPR021109 -
Lan5g1078 480 ProSiteProfiles Peptidase family A1 domain profile. 99 472 IPR033121 -
Lan5g1078 480 PANTHER OS07G0603500 PROTEIN-RELATED 14 476 - -
Lan5g1078 480 Pfam Xylanase inhibitor C-terminal 310 472 IPR032799 -
Lan5g1078 480 PANTHER BNACNNG47670D PROTEIN 14 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1078 Lan-Chr5 24098107 24099803 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g1078 97 478 Miscellaneous Gene Families AT1G44130 24.574 8.60e-11 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g1078 - - gmx:100805927 648.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g1078 5 24098107 24099803 Lan5g1078 5 24098107 24099803 ECH