Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1077 ATGTCGGTAAAGGAGTGCGACCACCACAAGGGCAGGAAGAAGAAAATCTTCCGGCGCATATTCTGGGGAATAATAATCTTCCTTTTCATCATCCTCCTCACAATTCTTATTGTTTGGGCCGTCCTCCGTCCAACTAAACCCACCTTCATCCTCCAAGACGTCACGGTTTACGCGTTTAATGCGACCGTACCGAACCTCCTCACCTCGAATTTTCAGGTCACCCTCTCCTCCCGAAACCCTAACGATAAAATTGGTGTTTACTACGACCGACTCGACACCTACGTCAGCTACCGGAGCCAGCAAATTACGCTCCGAACCGCCATTCCTCCGTCCTACCAAGGCCACAAGGAGGTTGACGTTTGGTCACCGTTTGTTTACGGAACTAATGTCCCTGTTGCTCCTTACAACTTTGTAGGGCTTAGCCAAGACCAAAGTAACGGTAACGTCCTTGTCGACGTTAAAATTGACGGTAGGGTTCGTTGGAAAGTTGGTGCATTCATTTCTGGACGTTACCATATCTATATTCATTGCCCTGCTTACATCACCTTCGGTGCACAAAGTAACGGAATATCCGTCGGGAATAACGCCGTTAAGTACCAGTTGGTCCAGCGATGCAGTGTTAACGTTTGA 630 0.4825 MSVKECDHHKGRKKKIFRRIFWGIIIFLFIILLTILIVWAVLRPTKPTFILQDVTVYAFNATVPNLLTSNFQVTLSSRNPNDKIGVYYDRLDTYVSYRSQQITLRTAIPPSYQGHKEVDVWSPFVYGTNVPVAPYNFVGLSQDQSNGNVLVDVKIDGRVRWKVGAFISGRYHIYIHCPAYITFGAQSNGISVGNNAVKYQLVQRCSVNV* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1077 209 Pfam Late embryogenesis abundant protein 74 175 IPR004864 -
Lan5g1077 209 PANTHER OS05G0367900 PROTEIN 4 209 IPR044839 GO:0098542
Lan5g1077 209 PANTHER LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN 4 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1077 Lan-Chr5 24090927 24092059 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g1077 14 177 EF-hand Containing Proteins AT5G21130 22.619 8.93e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g1077 - - lang:109336699 331.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g1077 5 24090927 24092059 Lan5g1077 5 24090927 24092059 ECH
Lan9g0365 9 5484213 5485242 Lan5g1077 5 24090927 24092059 LSH
Lan5g1077 5 24090927 24092059 Lan9g0365 9 5484213 5485242 PCT
Lan9g0365 9 5484213 5485242 Lan5g1077 5 24090927 24092059 PCT