Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1057 ATGGATTCCGAATCGTCTGGCGATTTTGTGAAATGTTTCAAATGTTGTGAGTCCGGGTGTGATTGCTCGATGGCGACGAGAAGGAAGGATGATGAGTTGGAACCAGAGGGTTTGGATTATTCGATTGCGCGTGTGGAAATAGGTGATGAGTGCACTGCATTGCGCGAGGCGGTGAGAAATCAGCAACAATGTATACAGAATCTGTATTCTGAATTGGAGGAGGAAAGGAACGCTTCTTCCTCGGCTGCGAATGAGGCTATGTCAATGATATTGAGGCTGCAGAGGGAAAAGGCACAACTTCAAATGGAAGCGCGGCAATTCAAGCGTTTCGTGGAGGAGAGGAATTCGCATGATCAGCAGGAGCTTCTAATCTTGGAGGATTTGTTGTATCAAAAAGAACAGGTGATTCAGTCACTAACATGTGAAATTCAAGCTTATAAACACCGGTTGTTGAGTTTCGGCATCACCGAGTCAGAGGCAGATGAAATTCCCCCTTATGAGTACCCTCCTTTGAGATGTAATGTAATGAATGTTGTGACCAATGATGATAATGATGACATCGATATTGAAAAACATGTATTCGGCGAAACACCTAGGGATCGTGCGAGGAACTTGAAAAATAAGATCACTCAACTCGAGACTAGTCCAACTTATAGCCAAATGGAGGGGGATTTAACAGGAAAAAGTGTTCTAGACAAAGTGGTGGTTGGACAATCTCCAAGATGGACTAAGCATTCTAGGAAATTTTCTTCCGAATCAACTTCATTTTGCCCCGAGCTTCTAATGGATTCTCCGAGGCTCAATTGTAGCTTTAAGAAGATCGATGAGGAGAATTCCAATTGGAACATGGTAGATAATGCATCAGAAGGTGGTGATGATATGAGTGACACTAGAGTCTATACAATTGACTATGTTAACAATGGGGCACCATATAATGGTTCCACTGATTTCAAAGCTGGAGCTAGTGCCTATGATGATTATGGAACCACTCCAAAGGAGATAGGATTTAATGCAGACTTTGAAGATCCCTATGTGAAGAAACTTTACACGAGGCTTCAGGCACTCGAGGCCGATAGGGAATCGATGAGGCAGGCAATCATTTCAATGCGTACCGATAAAGCACAGATTGTTTTACTTAAAGAAATAGCTCAAAATCTGTGCCAAGAGATGTCAGTGCAAAGAAAACAGGCAATGAGAAAGAGATCCGTTGTCGGTCGCTTGCCATTCGTGACGTTTTTTAAGTGGATCGCATCGATTCTTTTCTGGAGAAGGAAAGCTAATGAAATCAAGTACATGTTTGGGCTACCATCTAACAATGATGGCTTATATTTGCTCATCAACAAGGAACCTCATGTAAGGTCATGGAGATATCTTACAAGTACACATTTGGGAGATTAG 1398 0.4242 MDSESSGDFVKCFKCCESGCDCSMATRRKDDELEPEGLDYSIARVEIGDECTALREAVRNQQQCIQNLYSELEEERNASSSAANEAMSMILRLQREKAQLQMEARQFKRFVEERNSHDQQELLILEDLLYQKEQVIQSLTCEIQAYKHRLLSFGITESEADEIPPYEYPPLRCNVMNVVTNDDNDDIDIEKHVFGETPRDRARNLKNKITQLETSPTYSQMEGDLTGKSVLDKVVVGQSPRWTKHSRKFSSESTSFCPELLMDSPRLNCSFKKIDEENSNWNMVDNASEGGDDMSDTRVYTIDYVNNGAPYNGSTDFKAGASAYDDYGTTPKEIGFNADFEDPYVKKLYTRLQALEADRESMRQAIISMRTDKAQIVLLKEIAQNLCQEMSVQRKQAMRKRSVVGRLPFVTFFKWIASILFWRRKANEIKYMFGLPSNNDGLYLLINKEPHVRSWRYLTSTHLGD* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1057 465 Pfam Zein-binding 53 143 IPR007656 -
Lan5g1057 465 Coils Coil 345 372 - -
Lan5g1057 465 PANTHER BNAANNG28530D PROTEIN 1 440 - -
Lan5g1057 465 Coils Coil 55 103 - -
Lan5g1057 465 PANTHER ZEIN-BINDING DOMAIN-CONTAINING PROTEIN-RELATED 1 440 - -
Lan5g1057 465 ProSiteProfiles GTD-binding domain profile. 49 147 IPR007656 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1057 Lan-Chr5 23889895 23892789 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g1057 - - gmx:100797605 574.318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g1057 5 23889895 23892789 Lan5g1057 5 23889895 23892789 ECH
Lan9g0347 9 5275435 5278529 Lan5g1057 5 23889895 23892789 LSH
Lan5g1057 5 23889895 23892789 Lan9g0347 9 5275435 5278529 PCT
Lan9g0347 9 5275435 5278529 Lan5g1057 5 23889895 23892789 PCT