Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1041 ATGGCGGTTACCGAGGAAGAGTGTTCTTCCACTAAGCGCGGTGGTGCTGGCGGTGGTGCTTCTGCTCGCTCTTTCTCCTCTTCTTCATCTGCCAGACGTTATTACCTTTCCAAGTGCGTTCTCAGAGGAAGCGTTGTTCTTCAACTCCTTTACGGTCATATTCGTTCACCTACCTCAAACGACGTCGTTTTCGCTAAGGAGACATCTATAGAATTGGCAGTGATCGGTGAGGACGGAAATGTACATTCTGTTTGTGATCAGCCCGTTTTTGGCACCATTAAGGATCTTGCCATATTGCCCTGGAATGACAAATTCCGTACCCGCGATCCACAGATGTGGGGTAAAGACCTTTTGGTTGCTCTATCTGATTCTGGGAAACTTTCGTTGCTCACGTTTTGCAATGAAATGCACAGGTTTTTTCCCATAACACATGTTGAACTATCTAATCCTGGAAACCCAAGAGATCTTCCTGGAAGAATGTTAGCAATTGATTCCAGTGGTTGTTTTATTGCTGCCAGTGCATATGAGGATCGGCTGGTTCTCTTTTCGATGTCAACGACTGGCAATGATATAATTGATGAGAGAATAACATATCCTTCTGAAGGGGAAGGTCCAGCAGCTGCAGGTACTTCCAGAAGCATCCAGAGAACCAGTATACGTGGTACTATTTGGAGCATGTGCTTTATTTCGCAAAATTCCAAGCAACCAAGCAAGGAAGAAAATCCTTTACTAGCTGTTATTCTAAATAGGAAGGGATCACTTCTAAATGAATTGCTGTTATTGGAATGGAATATTAAAGCACATACAATCTTTGTTATTTCCATGTATGTTGAAGCTGGGCCCCTAGCGCATGACATTGTTGAAGTTCCTAATTCTTGTGGACTTGCATTTCTATTCAGGGCTGGTGATGCTCTCTTAATGGATTTTAGAGATCCTCACAATCCATGCTGTGTCTATAGAACTAGCTTAAACTTTTTACCTAATGTCGTGGAAGAGCAGGCTTATGTTGAAGACTCATGTAAATTACACGATATTGATGATGAACGCTTCAATGTTGCTGCCTGTGCTTTGTTGGAGCTGAGTGATTATGATCCTATGTGCATAGACAGTGACAATGGCAGTACAAGTTCAAGTTATAAGTACGTATGCTCATGGTGTTGGGAACCTGAAAATGGAAAAGATCCTAGGATGATCTTCTGTATAGATAGTGGAGAATTTTTTATGATTGAAATTCATTTTGATCCTGATGACCTTAATGTTAATCTCTCTGAGTGTCTCTATAAAGGTCTACCCTGTAAAGCACTTTTGTGGGTTGAAGGCGGATATCTGGCTGCTCTTGTAGAAATGGGAGATGGCATGCTCCTGAAATTGGAAGATGGAAGGCTTTGTCATTCAAACCCTATTCAAAACATTGCACCAATCTTGGACATGACAGTTGTGGATTATCATGATGAGAGGCATGATCAAATGTTTGCTTGCTGTGGTGTGGCACCTGAGGGTTCATTAAGGATTATTCGGAGTGGTATTAGTGTAGAAAAGCTACTTAGAACTGCTCCTATATATCAAGGTGTAACTGGCACTTGGACAGTTCGAATGAAAGTTGCTGATTCATATCATTCTTTCCTAGTTCTGTCGTTTGTTGAGGAGACCAGGATATTGTCAGTTGGCTTAAGTTTTACTGATGTGACTGATTCCGTTGGTTTCCATCCTAATGTATGTACTTTGGCATGTGGCCTTGTGAGTGATGGTTTGCTTGTTCAGATCCACCAATCTACTGTTAGGCTTTGTTTGCCTACGAAGGCTGCTCACCCTGAAGGTATCCCTTTGTCCTCTCCTATTTGCACATCTTGGTCCCCACACAATGTGAATATCAGTTTAGGGGTGGTTGGGCATAACTTTGTTGTTGTATCAACATCTAACCCATCCTTTTTGTTTATCCTTGGGGTTAGATTGCTATCAGCTTCTCATTATGAAATTTATGAAATGCAGCATTTGGAATTGCAGAATGAATTATCATGCATTTCCATCCCTAGACAAAAAAATGAGCAAAAACAAACACATTCACCCATTTCAGCAAATAATAGCTGCATGTCCTCCTTTTTGAGTGGGGTGGACAACAATAAGACATTTATTATTGGCACACATAAGCCTTCTGTGGAAATTTGGTCTTTTGCATCTGACGGTGTTACTGTAGTTGCTCGTGGGACAATTTCATTAACAAATACTATGGGAACTGCTATAACTGGGTGTGTACCCCAAGATGTGCGTCTTGTATTTGTTGACAAGTATTATGTTCTAGCTGGATTGAGGAATGGAATGCTCCTTCGCTTTGAGTGGCCGGCAGAACCATGTCCTTCATCACCACTAAATGTGGCGGATACTGCTCCATCTTCTATAAATTTGGTAAATTCTGTGACTAATGTTTTTGACAAGAGGAGTGGCCTTCCTTCCACTCTTCAATTGATTGCCATTCGTCGCATCGGCATTACTCCAGTTTTCTTGGTACCCCTGGGTGACACACTTGATGCTGATATAATTGCTCTGAGTGATAGACCTTGGTTGTTGCATACTGCAAGACACAGCCTTTCCTATACTTCAATCTCATTTCAGCCATCCACACATGTGACTCCTGTTAGCTCTGTTGAGTGTCCAAAAGGAATATTATTTGTTGCAGAGAACAGTTTGCATCTGGTGGAGATGGTGCAGAGCAAGAGACTTAATGTGCAGAAGTTTCATTTAGAGGGCACTCCACGGAAGGTCCTGTATCACAATGAAAGCCGGATGTTGCTTGTGATGAGGACAGAACTCAATTGTGGTACATGTTTGTCTGACATATGTTGTGTGGATCCCTTAAGTGGGTCAGTGCTGTCATCTTTTAGACTTGAACTTGGAGAAACAGGAAAATCCATGGAATTAATAAGAGTTGGAAGTGAGCAGGTGCTTGTAGTTGGAACTAGTCTGTCTTCTGGTCCAGCCATAATGCCCAATGGTGAAGCTGAGAGCGCCAAGGGTCGTCTTCTTGTTCTCTGCCTTGATCATGTGCAAAATTCAGATAGTGGTTCAATGACATTCTGTTCAAAAGTTGGGTCATCATCTCAAAGGACTTCACCATTCCATGAAATTGTTGCATATGCTCCTGAGCAGCTTTCAAGCAGCAGTCTTGGCAGCAGCCCTGATGACAATAGTTCTGATGGCATCAAACTTGATGAAAATGAAGTATGGCAGTTTCGATTGGTTTATGCAACTACATGGCAGGGAATGGTACTTGCAATCTGTCCTTATACTGATCATTACTTCTTGGCATCTGCTGGCAATGCCTTCTATGTATGTGGTTTCCCAAGTGACCATCCCCTAAGAGTGAGAAGGTTTGCTGTGGGAAGGACACGCTTCATGGTAACATCTTTGACTGCAGATTCTACTAGAATTGCAGTTGGTGATTGCCGTGATGGTATCCTTTTCTATCATTACCATGAGGAAGCAAGAAAGTTTGAGCAACTTTACTGTGACCCATCACAGAGGTTAGTTGCTGATTGCATTCTTATGGATACTGAAACAGCAGTTGTTTCAGATCGCAAAGGAAGCATTGCTGTTTTATGTACAGAATATTTGGAAGACAATGCAAGTCATGAAAGCAACTTGATACTAAGCTGTGGTTATTTCATGGCTGAGGTAGCCATGAGCATACAAAAGGGCTCATATTCATACAGACTTCCAGCTGATGATGTTTTGCAAGGTGGCAATACTCCCAAGACAAATGTTGACTCAATGATAAATACTGAAAATACTATTATTGCTAGTACTCTGTTAGGAAGCATAATCATCTTCACCCCTTTATCAAGGGAAGAATATGAGCTCTTAGAAGCGGTGCAAGCAAGACTTGTTGCCCATCATCTGACAGCGCCTGTTCTTGGAAACGATCATAACGAGTTCCGTAGCCGTGAAAATCCAGTTGGAGTGCCGAAGATACTCGATGGTGACATGTTGACCCAGTTTTTGGAGCTAACAAATATCCAGCAACAGATGATTTTGTCTTCTTCAGAGCCGCCACCAAAAACAGTAAAACCAAGCTCAAAGCCATTCCTACCTCCTCATATTTCTGTCAGCCAGGTAGTTCAACTTCTTGAAAGAGTTCATTATGCACTGAACTAG 4149 0.4203 MAVTEEECSSTKRGGAGGGASARSFSSSSSARRYYLSKCVLRGSVVLQLLYGHIRSPTSNDVVFAKETSIELAVIGEDGNVHSVCDQPVFGTIKDLAILPWNDKFRTRDPQMWGKDLLVALSDSGKLSLLTFCNEMHRFFPITHVELSNPGNPRDLPGRMLAIDSSGCFIAASAYEDRLVLFSMSTTGNDIIDERITYPSEGEGPAAAGTSRSIQRTSIRGTIWSMCFISQNSKQPSKEENPLLAVILNRKGSLLNELLLLEWNIKAHTIFVISMYVEAGPLAHDIVEVPNSCGLAFLFRAGDALLMDFRDPHNPCCVYRTSLNFLPNVVEEQAYVEDSCKLHDIDDERFNVAACALLELSDYDPMCIDSDNGSTSSSYKYVCSWCWEPENGKDPRMIFCIDSGEFFMIEIHFDPDDLNVNLSECLYKGLPCKALLWVEGGYLAALVEMGDGMLLKLEDGRLCHSNPIQNIAPILDMTVVDYHDERHDQMFACCGVAPEGSLRIIRSGISVEKLLRTAPIYQGVTGTWTVRMKVADSYHSFLVLSFVEETRILSVGLSFTDVTDSVGFHPNVCTLACGLVSDGLLVQIHQSTVRLCLPTKAAHPEGIPLSSPICTSWSPHNVNISLGVVGHNFVVVSTSNPSFLFILGVRLLSASHYEIYEMQHLELQNELSCISIPRQKNEQKQTHSPISANNSCMSSFLSGVDNNKTFIIGTHKPSVEIWSFASDGVTVVARGTISLTNTMGTAITGCVPQDVRLVFVDKYYVLAGLRNGMLLRFEWPAEPCPSSPLNVADTAPSSINLVNSVTNVFDKRSGLPSTLQLIAIRRIGITPVFLVPLGDTLDADIIALSDRPWLLHTARHSLSYTSISFQPSTHVTPVSSVECPKGILFVAENSLHLVEMVQSKRLNVQKFHLEGTPRKVLYHNESRMLLVMRTELNCGTCLSDICCVDPLSGSVLSSFRLELGETGKSMELIRVGSEQVLVVGTSLSSGPAIMPNGEAESAKGRLLVLCLDHVQNSDSGSMTFCSKVGSSSQRTSPFHEIVAYAPEQLSSSSLGSSPDDNSSDGIKLDENEVWQFRLVYATTWQGMVLAICPYTDHYFLASAGNAFYVCGFPSDHPLRVRRFAVGRTRFMVTSLTADSTRIAVGDCRDGILFYHYHEEARKFEQLYCDPSQRLVADCILMDTETAVVSDRKGSIAVLCTEYLEDNASHESNLILSCGYFMAEVAMSIQKGSYSYRLPADDVLQGGNTPKTNVDSMINTENTIIASTLLGSIIIFTPLSREEYELLEAVQARLVAHHLTAPVLGNDHNEFRSRENPVGVPKILDGDMLTQFLELTNIQQQMILSSSEPPPKTVKPSSKPFLPPHISVSQVVQLLERVHYALN* 1383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1041 1382 PANTHER DNA REPAIR/RNA PROCESSING CPSF FAMILY 28 1379 - -
Lan5g1041 1382 PANTHER CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR (CPSF) A SUBUNIT PROTEIN 28 1379 - -
Lan5g1041 1382 MobiDBLite consensus disorder prediction 1 25 - -
Lan5g1041 1382 Gene3D - 46 469 IPR015943 GO:0005515
Lan5g1041 1382 Gene3D - 509 905 IPR015943 GO:0005515
Lan5g1041 1382 Pfam Mono-functional DNA-alkylating methyl methanesulfonate N-term 116 676 IPR018846 -
Lan5g1041 1382 Pfam CPSF A subunit region 945 1333 IPR004871 GO:0003676|GO:0005634
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g1041 K12830 - gmx:100806799 2232.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g1041 5 23685411 23699618 Lan5g1041 5 23685411 23699618 ECH