Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1036 ATGTTAAGCGTTCTACGTGTTCATCTTCCTTCTGATATTCCAATTATTGGATGTGAACTCACTCCTTATGTTCTTCTTCGCCGTTCTGATAACAACTATACTACCGATGATGTTCCAGAAACTGCTCCGTTAGAAGGACATTTTCTAAGCTATAAGTGGTATCGCGTACAAAGTGATAAAAAGGTTGCTATATGTAGTATACATCCATCCGAGCTGGCTACACTACAGTGCATAGGTTGTGTTAAGGCCAAAATACCTGTTGCCAAAAGTTACCATTGCACTCCAAAGTGTTTTTCAGATGCATGGCAGCATCATCGCGTCTTACATGATCGTGCTGCAAGTGCAGTTAATGAAAATGGAAATGAGGAGGAGGAGTTGTTTGGCAGATTTAATAATTCTGGGTCTGGATCAATCGCTAGCGTATCTGCCACTATGTCAAGTGCTAGTTTGACAAATGGGTCCGCACCTATGTATCCAGCAGCTGTTACGCATCGAAATGGTGGTGAAACTTGGTTTGAAGTTGGACGATCTAAGACATATACCCCAACAGCTGATGACATTGGTCATGTCCTTAAGTTTGAGTGTGTTGTAGTTGATGCCGAGACAAAACTTCCAGTGGGGTATGCTAACACTTTACTAACTTCCCGTGTCATTCCTGCCCCCTCGCCTAGCCCACGCCGCATGGTACCTGTTGATGGGATGGGGCATTTAGATGCAGATGGACGTATAACATCTTCAGGAACTTTTACTGTTTTATCATACAACATATTGTCTGATGCATGTGCCTCAAAAAATGATCTATACAGTTACTGCCCCTCTTGGGCTCTCTCCTGGCCATATCGCAAACAAAATTTGTTACGGGAAATAGTTGGTTACTGTGCGGATATTATCTGTCTTCAGGAGATTCAAAGTGACCACTATGAGGAATTTTTTTCCCCTGAATTGGACAAACATGGCTATTATGGTCTTTACAAGAGAAAAACAAATGAGGTATACAATGGCAAACCCAATTCAATCGACGGTTGTGCAACATTTTTCCGCAGAGACAGATTTTCACATGTGAAGAAATATGAGGTTGAATTCAATAAGGCTGCACAGTCTTTAACAGATGCTATAATTCCACCCAATCTGCAGAAAACGGCCTTGAATCGGCTAGTTAAGGATAATGTTGCACTAATACTGGTTCTAGAAGCCAAAGTTAACAATCAACCTGTTGATAGTCCAGGGAAAAGACAGCTTCTTTGTGTGGCAAATACACATATAAATGTCCCCCAGGATTTAAAGGATGTCAAACTCTGGCAGGTGCATACTCTCTTAAAAGGATTGGAGAAAATAGCTGCAAGTGCAGACATTCCAATGTTGGTTTGTGGAGACTTTAATTCAGTTCCGGAAAGTGCACCTCATGCACTTCTTGCAATGGGGAAGGTAGATCCTTCACATCCCGATTTAGCAGTTGATCCGCTTAACATATTGCATCCTCTCAACAGATTGGCTCACCAATTGCCACTGGTCAGTGCATATTCATCTTTTGCAAGAACTGGTGGTCTCGGATTTGAGCAGCATAAACGGAGACTGGACAGCAAAACGAATGAGCCATTATTCACACACTTCACTAGAGATTTTATCGGTTCTCTGGATTACATATTTTATACAGCGGATTCATTGGTTGTGGAGTCATTACTGGAGTTATTGGACGAGGAGAGTTTAAGGAAAGACACAGCACTCCCTTCTCCCGAATGGTCCTCCGATCATATAGCTCTCTTAGCTGAGTTTCGCTGCTGCAAAAATAGATATAGGCGTTGA 1803 0.4215 MLSVLRVHLPSDIPIIGCELTPYVLLRRSDNNYTTDDVPETAPLEGHFLSYKWYRVQSDKKVAICSIHPSELATLQCIGCVKAKIPVAKSYHCTPKCFSDAWQHHRVLHDRAASAVNENGNEEEELFGRFNNSGSGSIASVSATMSSASLTNGSAPMYPAAVTHRNGGETWFEVGRSKTYTPTADDIGHVLKFECVVVDAETKLPVGYANTLLTSRVIPAPSPSPRRMVPVDGMGHLDADGRITSSGTFTVLSYNILSDACASKNDLYSYCPSWALSWPYRKQNLLREIVGYCADIICLQEIQSDHYEEFFSPELDKHGYYGLYKRKTNEVYNGKPNSIDGCATFFRRDRFSHVKKYEVEFNKAAQSLTDAIIPPNLQKTALNRLVKDNVALILVLEAKVNNQPVDSPGKRQLLCVANTHINVPQDLKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPESAPHALLAMGKVDPSHPDLAVDPLNILHPLNRLAHQLPLVSAYSSFARTGGLGFEQHKRRLDSKTNEPLFTHFTRDFIGSLDYIFYTADSLVVESLLELLDEESLRKDTALPSPEWSSDHIALLAEFRCCKNRYRR* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1036 600 CDD Deadenylase_CCR4 251 593 - -
Lan5g1036 600 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 34 595 - -
Lan5g1036 600 Gene3D Endonuclease/exonuclease/phosphatase 218 599 IPR036691 -
Lan5g1036 600 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 HOMOLOG 1-LIKE 34 595 - -
Lan5g1036 600 SUPERFAMILY DNase I-like 245 594 IPR036691 -
Lan5g1036 600 Pfam Endonuclease/Exonuclease/phosphatase family 252 584 IPR005135 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1036 Lan-Chr5 23650452 23655567 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g1036 278 471 EF-hand Containing Proteins AT5G54130 23.902 2.67e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g1036 K12603 - gmx:100775270 1058.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g1036 5 23650452 23655567 Lan5g1036 5 23650452 23655567 ECH