Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1033 ATGATGCTCAGAATCCGAAGCCGCGACGGTCTCGAACGAATCACAATCGACAACCCAAACATCACTATCTCCCAACTCCAAACCATAATCCAAACCCAACTCCATATCCCAATCCAAAACCAAACCCTCTCCACGAACCAAAACCTCCTCCTATCCAAAACCCACAACGATCTCAACCGTTTCACCGACATGTCAAACCCCAACACTCCTCTTTCCACTCTCAACCTCACCCACGGCTCCATCATCTTCCTAATTTACGACGGCGAAAGGCGAGTTATCGGTCCCGCCACGGCTTTTAGTCCCGCCGGCTCTTTCGGCCGAAAGATGACTATGGATGACCTTATTGCTAAACAGATGCGGGTCTCCCGACAGGAGGCCCCGCATTGTGAGTCCGTCTCTTTTGACCGCGATTGCGCTGATGCGTTCCAGCGTTATGTTAATGAGACGCTCGCGTTCGCGGTCAAAAGAGGCGGGTTTATGTATGGGAGGGTTAGTGAGGATGGGAGGGTAGAGGTTGATTTTATATATGAGCCGCCACAGCAGGGTTTGGAGGAGAATTTGGTAATTTTCCGGGATCATGAGGAGGAGAAGGTTGTGGAGGCGATTGCTTTAGGGTTAGGGATGAGGAAGGTTGGGTTTATTTTTACTCAGACTGTTAGTCAGGATAAGAAGGATTTTACGATGTCGAATCGGGAGGTTATTCAGGCGGTTGAGTTTCATGCTGAGAGTGGGTTGAAAGAGTGGGTTACTGCTGTGGTGAAATTGGAGGTGAATGAGGAGATGGGTGGTGCTGCTGATGTGCATTTTGAGGCTTTTCAAATGAGTGATGTTTGTGTGAAGTTGTTTAAGGAAGGGTGGTTCGAGACCGAGATTAAGGAGGAGGATGATCCTAAGTTGTCTAAGATGAAGAAAGATGTTGTTGTTGGTGTTAAGGATACTAAGGAGGTTGATAATGATTTCTTCTTGGTTGTTGTCAAAATCCTTGATCATCAGGGTCCTCTGTCATCTACATTTCCCATTGAGAACCGGAATACTCAAGTGACTATGAGGGCACTGAAGAATCATCTTGATCGGACAAAAAGTCTTCCATTTGTGAAGCGAATTTCTGATTTTCATTTGCTACTCGTATTAGCTAGGTTTTTAGACCTGGCTGCCGACGTTCCTGCATTGACAGAATGCGTGCAGACACAGACCGCTATACCCGAAGGTTATCAAATCCTTATCGAGTCCATGGCCGATGCCGCATGA 1248 0.472 MMLRIRSRDGLERITIDNPNITISQLQTIIQTQLHIPIQNQTLSTNQNLLLSKTHNDLNRFTDMSNPNTPLSTLNLTHGSIIFLIYDGERRVIGPATAFSPAGSFGRKMTMDDLIAKQMRVSRQEAPHCESVSFDRDCADAFQRYVNETLAFAVKRGGFMYGRVSEDGRVEVDFIYEPPQQGLEENLVIFRDHEEEKVVEAIALGLGMRKVGFIFTQTVSQDKKDFTMSNREVIQAVEFHAESGLKEWVTAVVKLEVNEEMGGAADVHFEAFQMSDVCVKLFKEGWFETEIKEEDDPKLSKMKKDVVVGVKDTKEVDNDFFLVVVKILDHQGPLSSTFPIENRNTQVTMRALKNHLDRTKSLPFVKRISDFHLLLVLARFLDLAADVPALTECVQTQTAIPEGYQILIESMADAA* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1033 415 SUPERFAMILY Ubiquitin-like 1 88 IPR029071 -
Lan5g1033 415 CDD Ubl_AtNPL4_like 1 85 - -
Lan5g1033 415 Gene3D - 1 100 - -
Lan5g1033 415 Pfam Nuclear pore localisation protein NPL4 1 84 IPR024682 -
Lan5g1033 415 ProSiteProfiles MPN domain profile. 131 278 IPR037518 -
Lan5g1033 415 CDD MPN_NPL4 120 377 IPR007717 -
Lan5g1033 415 Pfam NPL4 family 158 230 IPR007717 -
Lan5g1033 415 PANTHER NUCLEAR PROTEIN LOCALIZATION 4 2 92 IPR016563 GO:0006511
Lan5g1033 415 PANTHER NUCLEAR PROTEIN LOCALIZATION 4 103 412 IPR016563 GO:0006511
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1033 Lan-Chr5 23601873 23604435 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g1033 K14015 - gmx:100811623 665.611