Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1011 ATGAGTACAATTTCGGGTGTAGTTTCGCGGCAACTTCTGCCTGCTTGTGGCACTCTTTGTTTCTTCTGCCCTGCCATGAGGGCAAGGTCCAGACAGCCAGTGAAGAGGTACAAGAGGCTCATTGCTGATATTTTTCCTCGAAACCAGGAGGAAGGTCTGAATGATAGGAAAATATCAAAACTATGTGATTATGCAGCCAGAAATCCTTTACGCATCCCAAAGATCGTGACGGCCCTTGAGCAAAGGTGTTACAAGGAACTACGAAATGAGAATTTCCGTTCAACAAAAATAATCATGTGCATTTACCAGAAATTTCTGTCTTCTTGTAAAGAACAAATGCCACTATTTGCGAGTAGCCTGCTAACTATTATTCACACACTGCTCGATCAATCGCGGCAGGACGAAATGAAAATTGTAGGATGTCACATTCTTTTTGATTTTGTAAATAATCAGACTGATGGAAGTTACCTGTTCAACTTAGAAGGTATTATCCCAAAGCTTTGTCAATTAGCTCAAGAAACAGGGGATGATGAAAGGGCAAAAGCTAGCCGTTCAGCTGGTTTGCAATCCCTCTCATCAATGGTTAGGTTTATGGGTGAACACTCTCACATATCAGTTGAGTTTGATAATATTGTTTCTGTTGTCTTGGAAAACTATGGAGGTCCTAAGGAAAATTCATCAAACCTTGATCATGAGGAACAAGGTCCTGAAAATAAGTGGGTCCAAGAAGTGATGACAAATGAGGATCAAATCTCACCTTTGCTAGATATCAAGAAGAGGAATCCATCCTGGAGTACAATTGTTAACGACAAAGGCGAAGTTATTGTCCCAGAGGAACATGCCAAGAATCCCCATTTTTGGTCTGGGGTTTGCCTACATAATATGGCCAACTTAGCCAAGGAGGGCACTACCATACGTCGTATAATGGAATCTTTATTCAGATACTTCGATGATAGAAGTTTATGGTCTATAAACCATGGCCTTGCCTTTTCCGTTTTAAGGGATATGCTCTTTTTAATGGATGATTCTGGCAAAAATACACATGTTTTGCTTTCAATGTTAATTAAGCATCTGGATAATAAAACTGTCCTTAAAGAACCAAAGATGCAGTTAGACATAGTTGAGGTGACCACTTCGCTTGCCCAATATGCAAAGGTCCAATCTTCTATATCAATAATTGGTGCATTAAGTGATGCGATGAGACATTTGCGGAAGAGCATCCATTGTTCCCTAGATGAGTCAAATCTGGGAACTGATGTGATCGATTGGAACAAGAATTTCGGAGAAGCTGTGGATAAATGCCTTGTTCAGTTATCAAATAAGGTTGGAGAAGCAGGTCCAATCCTTGATGTTATGGCTGTGATGTTGGAGAATATCTCAACTATCACGGCAACATCCAGAAGCACAGTTTATGCTGTCTATCGGACTGCTCAAATTGTAGCTTCCTTACCAAATTTGTCTTATCAGAACAAGGCATTTCCTGAGGCATTGTTTCATCAACTATTCCAGGCTATGGTCCATCCAGATTATGAAACGCGAGCGGTGGCCCATCGCATCTTTTCTGTTGTTCTTGTGCCAACCTCTTTTTTCCCTCGGCCATATGCCAAGACACTGGGCCTTCCACGGACACTCTCGAGAGCAGTCTCTGTGTTCTCTTCTTCAGCTGCCTTATTTGAAAAGCTAAGACTAGAGAAGCGCTCTTCAAGTGAAAAATTACATCAATATAACAAAGAAAATACTAGTGGAGAGATTGAACCAGCTAATAGCAAGGGTGGAATCCTAAACAAATTGAAGTCAACCTATAGTCGGGTGGGTAGTGTGAACAACCCCCCTCTATTGACGATGGAAGATGAAATTACTGCAAACAATGATAATAAGAACTTGGACTCTGCAAGCCTCAGGCTGAATAGCCATCAGATAACTCGATTGCTATCATCAATTTGGGCACAGTCTCTCTCTCCTGAAAATATGCCTGAAAATTATGAAGCAATTGCTCATACATACAGCTTGGTGTTGCTTTTTTCTAGAGCTAAGAATTCATTTCATGAAGTCATAGTTCGGAGTTTTCAGCTTGCCTTTTCTTTGTGGAATATGTCTTTTAAAGAAGGGGAATTGCCACCATCTCGTCGAAGATCACTTTTTACTTTGGCAACTTCAATGATTCTGTTTTCTTCAAAAGCATGCAACATTGTCCCTCTTGCACATAGTGCCAATGCATTGCTTATAGAAAGGAAGGTTGACCCCTTCCTTCATTTGATTGGAGATTACAAGTTGCAAGCTGTCAGCTCTGCACCTGAAAATCTGACCATCAAGTATGGATCCAAAGAAGATGATCACCGGGCCTTGGACACACTTTCGGATTTATCTAATTTTACACACCAACCACATGAAGTCTTTGCTCCTGAAATCATTAGGAGCTTGGAAGTTTTTTCAAAAACTGGATCATCCTCAATAAGGGAGCAGCTGCTACAAGAATTCTCACCAGATGATATGTGTCAACTTGGATCTCGATTGGCCATGAATATGCCAGAAAAGGATGCTTCGGTAATTTCAATTGACGATGAGTCTATTCACGGCTCATTTGGAAGTCAAACAAAACACAATCCAGGATTGTTCATGGATATCCCTAGTATTATCGGTGCTAATCAACTTCTAGATTTAGTTTTGGACCCATCTCATCAACCTGGGAGGGTTTCTATATCAACTTCATATAATATGTCGTATGAGGATATGGCTGATAACTGTGAGGTACTTCTGATTGGAAAGCAGAACATGTCGAGATTGATGAGTACTCAACTGAAACAAGAATGTTTGGTGGACTCCTTTTTACCAAATCATGATACCAAATCGAAAAATCTGGGTTTATCATCCCATATAGATGCGAGTTATCAATTTCAGAAGGTGGGAAATCCTTTCCTTGATGAGAATATTGCTGTGGATTTTTACAAACCAACTTCTGATCCTGTTCCGATGTTGTGTGCATCCGAATATCAGAATCTTCCTTACCTATTCAAACTGCCCGCAACGAGTCCCTACGATAACTTTCTTAAAGCTGCTGGTTGTTGA 3066 0.4057 MSTISGVVSRQLLPACGTLCFFCPAMRARSRQPVKRYKRLIADIFPRNQEEGLNDRKISKLCDYAARNPLRIPKIVTALEQRCYKELRNENFRSTKIIMCIYQKFLSSCKEQMPLFASSLLTIIHTLLDQSRQDEMKIVGCHILFDFVNNQTDGSYLFNLEGIIPKLCQLAQETGDDERAKASRSAGLQSLSSMVRFMGEHSHISVEFDNIVSVVLENYGGPKENSSNLDHEEQGPENKWVQEVMTNEDQISPLLDIKKRNPSWSTIVNDKGEVIVPEEHAKNPHFWSGVCLHNMANLAKEGTTIRRIMESLFRYFDDRSLWSINHGLAFSVLRDMLFLMDDSGKNTHVLLSMLIKHLDNKTVLKEPKMQLDIVEVTTSLAQYAKVQSSISIIGALSDAMRHLRKSIHCSLDESNLGTDVIDWNKNFGEAVDKCLVQLSNKVGEAGPILDVMAVMLENISTITATSRSTVYAVYRTAQIVASLPNLSYQNKAFPEALFHQLFQAMVHPDYETRAVAHRIFSVVLVPTSFFPRPYAKTLGLPRTLSRAVSVFSSSAALFEKLRLEKRSSSEKLHQYNKENTSGEIEPANSKGGILNKLKSTYSRVGSVNNPPLLTMEDEITANNDNKNLDSASLRLNSHQITRLLSSIWAQSLSPENMPENYEAIAHTYSLVLLFSRAKNSFHEVIVRSFQLAFSLWNMSFKEGELPPSRRRSLFTLATSMILFSSKACNIVPLAHSANALLIERKVDPFLHLIGDYKLQAVSSAPENLTIKYGSKEDDHRALDTLSDLSNFTHQPHEVFAPEIIRSLEVFSKTGSSSIREQLLQEFSPDDMCQLGSRLAMNMPEKDASVISIDDESIHGSFGSQTKHNPGLFMDIPSIIGANQLLDLVLDPSHQPGRVSISTSYNMSYEDMADNCEVLLIGKQNMSRLMSTQLKQECLVDSFLPNHDTKSKNLGLSSHIDASYQFQKVGNPFLDENIAVDFYKPTSDPVPMLCASEYQNLPYLFKLPATSPYDNFLKAAGC* 1022
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1011 1021 Coils Coil 558 578 - -
Lan5g1011 1021 SUPERFAMILY ARM repeat 87 675 IPR016024 -
Lan5g1011 1021 PANTHER CYCLIN-LIKE PROTEIN 5 1021 - -
Lan5g1011 1021 PANTHER PUTATIVE, EXPRESSED-RELATED 5 1021 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1011 Lan-Chr5 23391947 23402790 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g1011 K21842 - gmx:100817296 1461.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g1011 5 23391947 23402790 Lan5g1011 5 23391947 23402790 ECH
Lan9g0326 9 5045923 5057010 Lan5g1011 5 23391947 23402790 LSH
Lan5g1011 5 23391947 23402790 Lan19g0283 19 3072723 3085060 LSH