Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0987 ATATCTACTAGCCAAGAAAATGCAAATAAGTGGGTCCAAGACAATGTCAAAACCTATGCCAATGTCAAATTCAGATACATTGTTGTGGGAAATGAAGTAAAGCCTGGTGACCCATTTACACAATTTGTAGTGTCTGCCATGCAAAACATTCAAACGGCCATTTCTGAAGCTGGCCTAGGGAATGAAATCAAAGTTTCCACTGCCATTGGAGGATATGCTGCTTTGGCCAATGGAAAATCATTCCCACCATCAACTGGCGAATTCAATTCTGATTATCTTGGAGCATATCTTGATGGTGTAATCAAATTTCTAGTGAAGAATAACTCTCCATTACTTGCTAATGTGTACCCTTATATCTATTATGTTAGCACGCAACGTACGGATCTTAGTCTTGACTATGCTTTTTTCGAAAAAGAATCAGTGGTAGTGAGAGATGGTTCACTTGGTTATAAGAACCTTTTTGATGCTAATGTGGATGCTATTTATTCTGCATTGGAGAGAGCAGGTGGAAAATCAGTGAGAATAGTTGTATCAGAGACAGGTTGGCCTTCATCTGGTGGCGAAGCAACTACACTTGATAATGCAAAAACTTATAACACAAACTTGGTTAAGCATGTTAAGGGAGGGACTCCAAAAAGGCCTAATAAACCCATTGAAACTTATGTGTATGCCTTGTTTGATGAGAATCAGAAGAACACTCCTCGTGATGCTTATTTCAAGAATCCTCAGTATGGCAAATTTTGGGGGCTTTTCCTTCCAAATAAACAACCTAAATACCCAATTAATCTCAATTAG 795 0.3849 ISTSQENANKWVQDNVKTYANVKFRYIVVGNEVKPGDPFTQFVVSAMQNIQTAISEAGLGNEIKVSTAIGGYAALANGKSFPPSTGEFNSDYLGAYLDGVIKFLVKNNSPLLANVYPYIYYVSTQRTDLSLDYAFFEKESVVVRDGSLGYKNLFDANVDAIYSALERAGGKSVRIVVSETGWPSSGGEATTLDNAKTYNTNLVKHVKGGTPKRPNKPIETYVYALFDENQKNTPRDAYFKNPQYGKFWGLFLPNKQPKYPINLN* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0987 264 Pfam Glycosyl hydrolases family 17 2 262 IPR000490 GO:0004553|GO:0005975
Lan5g0987 264 SUPERFAMILY (Trans)glycosidases 2 262 IPR017853 -
Lan5g0987 264 Gene3D Glycosidases 1 264 - -
Lan5g0987 264 ProSitePatterns Glycosyl hydrolases family 17 signature. 173 186 IPR000490 GO:0004553|GO:0005975
Lan5g0987 264 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 1 261 IPR044965 GO:0004553|GO:0005975
Lan5g0987 264 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG3-RELATED 1 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0987 Lan-Chr5 23141673 23142467 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0987 1 263 Glycoside Hydrolase AT3G57270 53.409 8.78e-89 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0987 - - lang:109347217 538.495