Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0979 ATGGGATCCCAATCACAGTCTCCTCTTCACGTTGTTGACTTCACTGATGAAAACATGAAGCCTGGCACTGGTGCATGGTTTTCAGCCTGCAATGTTGTGAGGACTGCACTTGAGGATCATGGTTGTTTCATCGCGCACTACAATAGAGTCGGCAAAGAGCTTTGCGACTCTGTTGTGTGCGCGATGGAACACCTGTTTGCTCTCCCAATTGAAACAAAAGTACAAAAGACTAGTGAGAAGCTTTTCCGTGGCTACTTAGGACAAATCACATGGCTTCCTTTGTATGAATCTTTGGGGGTTGATAATCCATTGACTATGGATGGATGTCAAAAATTTGCACACATTATGTGGCCACAAGGGAATAATCGTTTCTGTGAAAGCATAAATGATTATGCTAAGCTGTTAGGAGAGTTAGATCATATGGCCAAGAGAATGGTTTTTGAGAGCTATGGTGTGGACATGAAAAGATGTGATTCTTTCATAGAATCGAGCAATTATGTGCTTCGTTGTATGCAATATAGAACAGTGAAGATGAATGAAAATGAGTTAGGAATGCATTGTCACACAGATTTGAGCACCATATCAATAGTGCATCAACTGAATAATCTAAATGGCTTGGAAATCAAAATTATGGAGGGGGAATGGTGTGGTGTTGATGCCTCACCAAACTTGTTTGTGGTCATGGCCGGTGATGCATTACAGGTGTGGAGTAATAGAAGGATACGGTCATGCGAACATAGGGTCATAATGAATGCAAAGAAGATTAGATACTCTATGGGACTATTTTCTTTTATTGATAACATGGTGCATATACCAGAAGAGCTAGTTAATGAACAACATCCCTTGCGTTATAAACCAATATTCAACCATGATGAATACATTAGTTTCTATGACAAAGAGAAAATCAAAGATCATAATTCTAGAATTGAAGCCTATTGTGGAATCTGA 948 0.3956 MGSQSQSPLHVVDFTDENMKPGTGAWFSACNVVRTALEDHGCFIAHYNRVGKELCDSVVCAMEHLFALPIETKVQKTSEKLFRGYLGQITWLPLYESLGVDNPLTMDGCQKFAHIMWPQGNNRFCESINDYAKLLGELDHMAKRMVFESYGVDMKRCDSFIESSNYVLRCMQYRTVKMNENELGMHCHTDLSTISIVHQLNNLNGLEIKIMEGEWCGVDASPNLFVVMAGDALQVWSNRRIRSCEHRVIMNAKKIRYSMGLFSFIDNMVHIPEELVNEQHPLRYKPIFNHDEYISFYDKEKIKDHNSRIEAYCGI* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0979 315 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 163 267 IPR005123 -
Lan5g0979 315 Pfam 2OG-Fe(II) oxygenase superfamily 173 263 IPR044861 -
Lan5g0979 315 Gene3D - 9 314 IPR027443 -
Lan5g0979 315 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 4 314 - -
Lan5g0979 315 PANTHER 2-OXOGLUTARATE-DEPENDENT DIOXYGENASE 4 314 - -
Lan5g0979 315 SUPERFAMILY Clavaminate synthase-like 8 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0979 Lan-Chr5 23052808 23055731 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0979 130 285 Glycosyltransferase AT5G59530 29.193 5.82e-12 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0979 - - gmx:100775440 506.908