Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0971 ATGAGGCCGCAGAAGCATTTCACGGTGGCGCTTGCGGTGGTTTTTCTGAGTGCTTCATTCGCGTACTATAACTACGGTATCAAGCCATCCAACAATGACGGCGCTATATCATCCATGAAGGTTTTACATTACGAGGTTGTTCCAATCGAGAACGCGGTGGGACCGGAGAGTTTCGCTTTCGATGCCAACGGCGGAGGCCCTTACACCGGCGTATCTGACGGCCGAATCATTAAGTGGCATCCCCTTGAGAAACGGTGGCGCAACTTCGCCACCACTTATTCACACAGAAATGATCAATGTGGAGGACCATATAATAAGCACCTCAAGACCGAACACATTTGTGGGCGCCCCTTAGGATTGTGCTTCAGCAACATCACAGGTGATCTTTACATTGCTGATGCTTATAAAGGTCTCATTATTGTTGGACCCAATGGTGGCACTGCCACAACAGTTTCATCACACATAGAAGGTTCTCCTTTTGGGTTTACAAATAGTGTAGATATTGATCAACAAACTGGAACAGTCTACTTCACTAGTAGCAGTTCAAAATATGAAAGGAGGAATTATGTGTCACTAATCCTAAGCAAAGATAAAACAGGGAAGCTAATGAAATATGATCCACAAAGCAAACAAGTTAGCCTGCTTCTAAACAATCTCTCATTTGCAAATGGAGTAGCACTAAGCAAAAACAGTGATTATATTCTAATAGCAGAGACCAACAACTGTAGAGTACTAAGGTATTGGCTACAAACACCAAAAGCTGGAACCTTGGAAGTCTTTGCTAATCTCCCAGGTTTCCCAGACAACATTAAACGTAGTCCAAGAGGTGGATTTTGGGTTGGAATTTATTCAAGAAGAGATAAATTTGTCCAATGGATTCTATCATATCCTTGGATTGGAAGAACTCTTCTGAAGCTTCCTTTAGATATTACCAAAGTTTATTCATATTTGGCTAAGCTGAAAGGGAGTAGTGGATTGGCAATTAGGTTAAGTGATGAGGGTAATGTTTTGGAAATTGTTGAAAGTGGAACAAAAGGTAGGTCTATTAGTGATGTTGAGGAAAGAGATGGGGTATTATGGGTTGGATCCATAGAGACACCTTTTGCAGGAAAGTATCATATTCTTGGAGCACAAGGATAA 1140 0.4184 MRPQKHFTVALAVVFLSASFAYYNYGIKPSNNDGAISSMKVLHYEVVPIENAVGPESFAFDANGGGPYTGVSDGRIIKWHPLEKRWRNFATTYSHRNDQCGGPYNKHLKTEHICGRPLGLCFSNITGDLYIADAYKGLIIVGPNGGTATTVSSHIEGSPFGFTNSVDIDQQTGTVYFTSSSSKYERRNYVSLILSKDKTGKLMKYDPQSKQVSLLLNNLSFANGVALSKNSDYILIAETNNCRVLRYWLQTPKAGTLEVFANLPGFPDNIKRSPRGGFWVGIYSRRDKFVQWILSYPWIGRTLLKLPLDITKVYSYLAKLKGSSGLAIRLSDEGNVLEIVESGTKGRSISDVEERDGVLWVGSIETPFAGKYHILGAQG* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0971 379 Gene3D - 36 376 IPR011042 -
Lan5g0971 379 Pfam Strictosidine synthase-like, N-terminal 45 79 - -
Lan5g0971 379 PANTHER STRICTOSIDINE SYNTHASE-RELATED 6 370 - -
Lan5g0971 379 PANTHER PROTEIN STRICTOSIDINE SYNTHASE-LIKE 2 6 370 - -
Lan5g0971 379 SUPERFAMILY Calcium-dependent phosphotriesterase 45 367 - -
Lan5g0971 379 Pfam Strictosidine synthase 164 251 IPR018119 GO:0009058|GO:0016844
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0971 Lan-Chr5 22884222 22893192 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0971 - - gmx:100789150 522.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0971 5 22884222 22893192 Lan5g0971 5 22884222 22893192 ECH