Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0649 ATGAATGGAGGTAACAAACGGAAGCGCCAAGACATGGCCTTGGCTGTTTCAGATTCTCTCTCAAACGAAGAGAGAATCGTTTACAACATTATCCGTTCAAAGGAAAACATGGGTATATGGAGTGGTGACATCAAAAGAGAAACCACAATCCCAGAAAACATTTTCAAGAAAGCACTCAAGTCACTTGAAGCCAAGCAATTCATCAAACAGGTTGTGAACATTCAGAACAAAGCCAGAAAACTTTTCATGGCCACTGAGTTCCAACCCTCTAAGGAGATCACTGGTGGGGATTGGTACAGTGATGGAAAACTCGACATCGAATTCATTGACACACTCAAGCAGCTATCTTTGGGGTACCTTTCTAGGCAGAAGGTTGCAACAGTTGATATGGTTTTGAAGTTTTTCAAGGAGTCCGGGGCGTTTACGGTTGATGTTAGTAATCAGAATTTGGAGGAGATTTTGAAGACTTTGGTTTTGGATGATAAGGTTTCTGAGGTGAAGAGTACTGGGTTTGATGATTTTGCTGGTGTTCCTCTTGGTAGAGTTTGTTATAGAATCAAGAGTAAGGTTGGTGGTGTTAGAGAAGAAAAAGTGGGTGCTATGGCTTCTATTCCTTGTGGAGTTTGTCCAAGGATTAATTTTTGTACACCCGATGGTGTTGTTTCTCCCAAAAATTGTGTCTATTATGATAAATGGTTGGATTTCTGA 708 0.4082 MNGGNKRKRQDMALAVSDSLSNEERIVYNIIRSKENMGIWSGDIKRETTIPENIFKKALKSLEAKQFIKQVVNIQNKARKLFMATEFQPSKEITGGDWYSDGKLDIEFIDTLKQLSLGYLSRQKVATVDMVLKFFKESGAFTVDVSNQNLEEILKTLVLDDKVSEVKSTGFDDFAGVPLGRVCYRIKSKVGGVREEKVGAMASIPCGVCPRINFCTPDGVVSPKNCVYYDKWLDF* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0649 235 Pfam RNA polymerase Rpc34 subunit 123 234 IPR007832 GO:0005666|GO:0006383
Lan5g0649 235 Pfam RNA polymerase Rpc34 subunit 18 122 IPR007832 GO:0005666|GO:0006383
Lan5g0649 235 SUPERFAMILY "Winged helix" DNA-binding domain 17 86 IPR036390 -
Lan5g0649 235 Gene3D - 21 85 IPR036388 -
Lan5g0649 235 PANTHER RNA POLYMERASE III DNA DIRECTED , 39KD SUBUNIT-RELATED 16 235 IPR016049 -
Lan5g0649 235 PIRSF RNAP3_C34/C39 5 235 IPR007832 GO:0005666|GO:0006383
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0649 Lan-Chr5 14965026 14966738 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0649 K03025 - gmx:100783276 314.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0649 5 14965026 14966738 Lan9g1051 9 17726089 17727800 LSH