Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0645 ATGATAAAGATGATACATATCCTTCTCTTTGTCCTTCTCTCTGTCCTTCTCTCATCCATTTCCAATGCTTCTGTCAATGACTTTTGTGTAGCAGACCTAAAGGCCCCAGATACCCCTTCAGGCTATCACTGCAAGTCACCAACCACAGTAACAGCCGATGACTTTGTATTTCATGGCTTTGTAGCTGGAAACACCACAAACACTTTCAATGCTGCATTAACCTCTGCATTTGTTACTGATTTTCCTGGGATTAATGGACTTGGCATCTCTGCAGCAAGGTTAGACATAGCTCATGGTGGATCAATACCAATGCACACTCACCCAGGTGCAACTGAACTACTCATAATGGTAAAAGGTGAAATCACTGCTGGATTTATGACACCAACTGCAGTTTATTCAAAGAAGTTGAAACCAGGGGATCTTTTTGTTTTTCCACAAGGGCAGTTGCATTTTCAAGCTAATTCTGGTAAGGGGCAAGCCACTGCTTTTCTTGCTTTTAGTAGTTCAAACCCTGGGGCCCAACTCCTTGATCTTCTACTGTTTGGGAACAACTTACCTTCTGACTTAATTGCACAAACTACCTTCCTTGATGTTGCACAAATTAAAAATATTAAGGCTCGCTTTGGTGGCAGAGGTTAA 639 0.4194 MIKMIHILLFVLLSVLLSSISNASVNDFCVADLKAPDTPSGYHCKSPTTVTADDFVFHGFVAGNTTNTFNAALTSAFVTDFPGINGLGISAARLDIAHGGSIPMHTHPGATELLIMVKGEITAGFMTPTAVYSKKLKPGDLFVFPQGQLHFQANSGKGQATAFLAFSSSNPGAQLLDLLLFGNNLPSDLIAQTTFLDVAQIKNIKARFGGRG* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0645 212 ProSitePatterns Germin family signature. 100 113 IPR019780 GO:0030145
Lan5g0645 212 SUPERFAMILY RmlC-like cupins 27 209 IPR011051 -
Lan5g0645 212 CDD cupin_OxOx 25 208 - -
Lan5g0645 212 PRINTS Germin signature 105 125 IPR001929 GO:0030145
Lan5g0645 212 PRINTS Germin signature 134 154 IPR001929 GO:0030145
Lan5g0645 212 PRINTS Germin signature 167 182 IPR001929 GO:0030145
Lan5g0645 212 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 1 12 208 - -
Lan5g0645 212 Gene3D Jelly Rolls 22 211 IPR014710 -
Lan5g0645 212 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 12 208 - -
Lan5g0645 212 Pfam Cupin 61 201 IPR006045 -
Lan5g0645 212 SMART Cupin_1_3 58 202 IPR006045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0645 Lan-Chr5 14573304 14574167 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0645 2 210 Miscellaneous Gene Families AT5G20630 55.924 7.67e-77 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0645 - - gmx:100527498 343.199