Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0636 ATGCTAGGTGGACTTTTTTCACCAAAGATCAAAGGCACAGTGGTGCTAATTCAAAAGAATGTGTTAGATATTAACAGCATACTTAGTGCTGAGAAGGTTGTGAATGGAGTATTAGAAGGAATTACATCAATATGGGATACTGCTTCTTCCTTCTTGGGCAGTTCAGTTTCCCTTCAGTTGATTAGTGCTACTAAAACTGATTCAAGTGGGAAAGGAAAAGTTGGAAATAAGGCTTATTTAGAAGGTGCTATCAACAATTTACCAACATTAGGAGCACAACAAAATGCATTCACCATTCATTTTGAATTTGATAGTAACTTCGGAATTCCTGGAGCATTTTATATTCAGAACTATATGACAGATGAGTTCTTTCTTGTGAGTTTGACTCTTGAAGATATTCCTAACCAAGGAACCATCCACTTTGCTTGCAACTCATGGGTTTACAATTTCAAGAAATATCAACATGATCGCATTTTCTTTGCTAATAACACTTATCTACCAAGTCAGACACCAGCTGCAGTAGTCTATTATAGACAATTAGAATTGCAGAATTTAAGAGGAGATGGAAAAGGGGAGCGATTGGAATGGGAAAGAATCTATGATTATGATGTTTACAACGATTTAGGTGAACCTGATAAAGGTGCTAGTTATGCTAGACAAGTTTTGGGAGGATCTAGCGCGTTTCCTTATCCTCGCAGGGGGAGAACAGGAAGGCCAAAAACAAATACAGATCCTAATAGTGAGAGCAGGAGTGGCAGTGTTTATATTCCAAGAGATGAAGCTTTTGGTCACTTGAAATCCTCTGATTTTCTTATCTATGGACTGAAGTCTGTAGCACAAGACGTAACTTCTGTGTTACAATCTGTATTTGAATTAGATTTCACACCAGATGAGTTTGAAACCTTTGATGAAGTGAGAGAACTCTATGAAGGAGGAATTAAGCTTCCTACAGATGCAATTAGCAAAATTAGTCCTTTACCAGTGTTGAAGGAAATTTTTAGAACCGATGGCGAGGAGTTCCTCAAGTTTCCAACACCTAAAGTTATTCAAGTGAGTAAGTCTGCATGGATGACAGATGAAGAATTTGGAAGGGAGATTATTGCTGGTGTAAATCCTGGCTTAGTTCATAGTCTTGAAGTGTTTCCTCCAGCTAGTAAGCTAGACAGTGCAATCTATGGTGATCAAACAAGTACAATAACCAAAGAACATATTGAACCTAACTTAGATGGGCTCACTACAGATCTGGCTATCGAGAGCAAGAAATTGTTCATACTTGATCACCATGACACAATAATTCCATATTTGAGGCTAATAAACTCAACTTCTACAAAGGCTTATGCTTCTAGAACCATACTTTTCTTGAAAAGTGATGGAACTTTAAAGCCAGTGGCCATTGAGTTAAGTTTGCCACATCCTCAGGGAGATCAATATGGTGTTGTTAGTAATGTATACTTGCCTGCAGAAGAAGGTGTTGAAAGTACTATTTGGTTATTGGCTAAGGCTTATGTCATTGTTAATGATTCATGCTATCATCAACTTGTTAGCCACTGGTTGAATACTCATGCAGTGGTTGAGCCGTTCGTCATAGCAACACATAGGCAGCTCAGCGCTGTTCACCCGATTTATAAACTCTTGTATCCTCATTATCGCGACACTATGAATATTAATGCCCTTGCTAGGGGATCCCTGGTCAATGCAGATGGTATTATCGAAAAAACGTTCTTGTGGGGCGGTTATGCCATGGAAATATCTTCTGTAGTTTACAAGGATTGGGTTTTTACTGATCAAGCATTACCTGCTGATCTTATCAAGAGAGGAATAGCAGTGGAGGATTCAAGTTCCCCCCATGGTCTTCGCCTGGTGATAGAGGACTACCCTTATGCTGTTGATGGACTAGACATTTGGGGTGCGATTAAGACATGGGTCGAAGACTATGTCTCGCTATACTACACTTCAGACGACACAATTGAGCAAGATGTTGAACTCCAATCTTGGTGGAAAGAAGTCGTAGAGGTTGGTCACGGTGACAAGAAAGATGAGCCATGGTGGCCTAAACTGCAAACTCGAGAAGATCTCATTCATGTTAGCACTATTGTCATATGGACTGCTTCGGCACTTCATGCAGCTGTTAACTTTGGACAATATCCGTATGGAGGTTTCATCTTAAACCGTCCAACTCTTAGCAGGCGATTTATACCCGAGGAAGGAACTGATGAGTACAATGAGCTAATCACAAACCCTCAGAAGGCGTACTTAAGAACTATTACACCTAAGTTCCAAACTCTCATCGATCTTTCAGTTATAGAAATCTTATCAAGGCATGCTTCTGATGAGCTCTACCTTGGGCAAAGAGATAGTGAATATTGGACTTCTGATACAAAAGCTTTGGAGGCCATCAAGAAGTTTGGAACAACACTAGCTGAAATTGAGGCACAACTAGTACAGAGGAACAACAATGAGACATTGCGAAACCGAGTTGGTCCGGTTACAATGCCTTACACACTACTTTATCCTTCAAGTGCGGAAGGACTAACTTTTAGAGGAATCCCCAACAGTATCTCCATCTAA 2568 0.3995 MLGGLFSPKIKGTVVLIQKNVLDINSILSAEKVVNGVLEGITSIWDTASSFLGSSVSLQLISATKTDSSGKGKVGNKAYLEGAINNLPTLGAQQNAFTIHFEFDSNFGIPGAFYIQNYMTDEFFLVSLTLEDIPNQGTIHFACNSWVYNFKKYQHDRIFFANNTYLPSQTPAAVVYYRQLELQNLRGDGKGERLEWERIYDYDVYNDLGEPDKGASYARQVLGGSSAFPYPRRGRTGRPKTNTDPNSESRSGSVYIPRDEAFGHLKSSDFLIYGLKSVAQDVTSVLQSVFELDFTPDEFETFDEVRELYEGGIKLPTDAISKISPLPVLKEIFRTDGEEFLKFPTPKVIQVSKSAWMTDEEFGREIIAGVNPGLVHSLEVFPPASKLDSAIYGDQTSTITKEHIEPNLDGLTTDLAIESKKLFILDHHDTIIPYLRLINSTSTKAYASRTILFLKSDGTLKPVAIELSLPHPQGDQYGVVSNVYLPAEEGVESTIWLLAKAYVIVNDSCYHQLVSHWLNTHAVVEPFVIATHRQLSAVHPIYKLLYPHYRDTMNINALARGSLVNADGIIEKTFLWGGYAMEISSVVYKDWVFTDQALPADLIKRGIAVEDSSSPHGLRLVIEDYPYAVDGLDIWGAIKTWVEDYVSLYYTSDDTIEQDVELQSWWKEVVEVGHGDKKDEPWWPKLQTREDLIHVSTIVIWTASALHAAVNFGQYPYGGFILNRPTLSRRFIPEEGTDEYNELITNPQKAYLRTITPKFQTLIDLSVIEILSRHASDELYLGQRDSEYWTSDTKALEAIKKFGTTLAEIEAQLVQRNNNETLRNRVGPVTMPYTLLYPSSAEGLTFRGIPNSISI* 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0636 855 SMART LH2_4 8 162 IPR001024 GO:0005515
Lan5g0636 855 ProSiteProfiles PLAT domain profile. 34 161 IPR001024 GO:0005515
Lan5g0636 855 PRINTS Lipoxygenase signature 493 510 IPR013819 GO:0016702|GO:0046872
Lan5g0636 855 PRINTS Lipoxygenase signature 511 528 IPR013819 GO:0016702|GO:0046872
Lan5g0636 855 PRINTS Lipoxygenase signature 531 551 IPR013819 GO:0016702|GO:0046872
Lan5g0636 855 ProSitePatterns Lipoxygenases iron-binding region signature 2. 538 548 IPR020834 GO:0016702|GO:0046872
Lan5g0636 855 CDD PLAT_LH2 9 162 IPR042057 -
Lan5g0636 855 Gene3D PLAT/LH2 domain 6 165 - -
Lan5g0636 855 PANTHER LIPOXYGENASE 7 855 IPR000907 GO:0016702|GO:0046872
Lan5g0636 855 Gene3D - 166 265 - -
Lan5g0636 855 Gene3D - 266 354 IPR027433 -
Lan5g0636 855 Pfam Lipoxygenase 175 838 IPR013819 GO:0016702|GO:0046872
Lan5g0636 855 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 164 855 IPR013819 GO:0016702|GO:0046872
Lan5g0636 855 Gene3D - 355 488 - -
Lan5g0636 855 Pfam PLAT/LH2 domain 66 160 IPR001024 GO:0005515
Lan5g0636 855 PANTHER SEED LINOLEATE 9S-LIPOXYGENASE-3 7 855 - -
Lan5g0636 855 Gene3D - 489 854 - -
Lan5g0636 855 ProSitePatterns Lipoxygenases iron-binding region signature 1. 511 525 IPR020833 GO:0016702|GO:0046872
Lan5g0636 855 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 8 165 IPR036392 GO:0005515
Lan5g0636 855 MobiDBLite consensus disorder prediction 226 253 - -
Lan5g0636 855 PRINTS Plant lipoxygenase signature 131 149 IPR001246 GO:0016491
Lan5g0636 855 PRINTS Plant lipoxygenase signature 157 178 IPR001246 GO:0016491
Lan5g0636 855 PRINTS Plant lipoxygenase signature 196 212 IPR001246 GO:0016491
Lan5g0636 855 PRINTS Plant lipoxygenase signature 229 248 IPR001246 GO:0016491
Lan5g0636 855 PRINTS Plant lipoxygenase signature 296 317 IPR001246 GO:0016491
Lan5g0636 855 PRINTS Plant lipoxygenase signature 341 357 IPR001246 GO:0016491
Lan5g0636 855 PRINTS Plant lipoxygenase signature 380 399 IPR001246 GO:0016491
Lan5g0636 855 PRINTS Plant lipoxygenase signature 446 470 IPR001246 GO:0016491
Lan5g0636 855 PRINTS Plant lipoxygenase signature 768 782 IPR001246 GO:0016491
Lan5g0636 855 SUPERFAMILY Lipoxigenase 166 855 IPR036226 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0636 Lan-Chr5 13644205 13649081 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0636 9 855 Acyl Lipid Metabolism Gene Families AT1G55020 57.974 0.0 1026
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0636 K15718 - gmx:547869 1329.69