Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0635 ATGTTTTCAGGGGTGTCAGGTCTCATCAACAGAGGCCAGAAACTTAAAGGAACTGTTGTGTTGATGCGCAAGAATGTGTTGGATGTGAATAAGGCTGCCGGAGTTACTAGTGATGTAACTAGCGGTGATGTTATTCGTGGCCTCGGAGGCATAATCGGTGGCGGCATCGACGTTGTAACCACCGTGGCTGGCACGACTATTGACAATCTCACTTCTTTCTTGGGACGGAACGTTGGTCTACAGCTCATTAGTGCTACTGCCACTGACGCAAGTGGAAAAGGGAAAGTGGGTAAGGAAACATTTTTGGAAGGTATTATTCTGTCGTTACCAACCTTGGGAGCAGGCCAATCTGCATTCGATATTCATTTCGAATGGGATAGTAACTTTGGAATACCAGAAGCATTTTATATAAGAAATTATATGCAAGTTGAGTTCTTCCTTGTGAGTTTAACTCTTGAAGATGTTCCAAACCAAGGAACTATTCGGTTTGTTTGCAACTCATGGGTTAACAACTTCAAAAGTTATGAAAAGGATCGCATTTTCTTTGTCAACAAGACATATCTTCCAAGTGAAACACCAGCTGCACTAGTTAAGTACAGAGAAGAAGAATTGAAGACTTTAAGAGGAAATGGAAAAGGTGAACGTAAGGAATGGGAAAGGATCTATGATTATGATGTTTACAATGATTTGGGCAAGCCAGATAGTGGTGAAAAGTATGCTCGCCCAATCCTTGGAGGTTCTAGCACCCATCCCTACCCTCGTAGGGTTAGAACTGGTAGAAGACCAACCAGAAAAGATCCTAACAGTGAAAGTCCAGGGGACTCTTACATTCCAAGAGATGAAAACTTTGGTCACTTAAAGTCATCAGATTTCCTTATATATACACTAAAATCACTATCTCAAGCTGTGTTGCCTGCACTTCAGTCAGTTATTTTTGGTGAGTTCGGTAGCTTCGATGAAGTTCGTGGACTCCAAGAAGGTGGCATTAAGCTACCTACAGATGTTCTTAGTGCCATTAGTCCCTTACCAGCCCTCAAGGAAATTTTTCGCACCGATGGCGAACAAGTTCTCAAGTTTCCACCACCTCATGTGATTAATGTTAGCAAATCTGCATGGATGACTGATGAAGAATTTGCAAGGGAGATGATTGCTGGGGTAAACCCTTGTGTAATTCGTCTTCTTCAAGAGTTCCCAGTACAGAGCAAACTAGATGCTACAATCTATGGTGACCAAACCAGTAAAATAACAAAAGAACAGTTAGAGATTAACCTTGAAGGGCAAACAGTAGAAGAGGCACTTAGCTTTCAGAGATTGTTCATATTGGATTACAATGATGCCTTCATTCCGTATTTGAGAAAGATCAATGAATTTGCAAAGGCTTATGCCACCAGGACAATCCTTTTCTTAAAAGATGATGGGACTTTAAAGCCAATTGCTATCGAATTAAGTTTGCCACATCCAAACGGAGATCAATTTGGATCTGAGAGTAAAGTCATCTTGCCTGCGACCGAAGGTGCTGAAAGTACAATCTGGCTATTGGCCAAGGCTCATGTAATTGTAAATGACTCATGCTATCATCAACTAATGAGTCACTGGTTGAATACTCATGCCGTGATTGAGCCATTTGTCATAGCAACAAACAGGAATTTAAGTGTGCTTCACCCGATTTATAAACTTCTCTATCCTCACTATCGCGACACGATAAATATCAATGGTCTTGCTCGACAATCACTAATTAACGCAGATGGAATTATTGAGCAGTCATTTTTACCCGGCCCGTATTCCCTTGAGATATCCTCAGCAGTTTACAAGAACTGGGTTTTCACTGATCAAGCATTACCAGCTGATCTCATCAAGAGAGGATTGGCAATTAAGGATCCTTCTTCCCCTCATGGCCTGCAACTTCTGATAAAGGACTATCCTTACGCTACCGATGGATTAGAGATTTGGGATGCTATTAACACATGGGTTAGAGAATATGTATCATTGTATTACCCAACGGACGAGGCAATTCGAAAAGACGCCGAACTACAAGCATGGTGGAAGGAAGCTGTAGAGAAGGGTCATGCAGACTTGAAAGATAAGCCATGGTGGCCTAAGTTGCAGAATGTTGAAGAGCTGATTCAATCTGCTTCAATTATCATATGGACTGCTTCTGCACTTCATGCTGCTGTTAATTTCGGTCAGTATCCTTATGGAGGTTATATCTTGAACCGCCCGACTATTAGCCGAAGATTGATCCCAGAACAAGGAACTCCAGAGTATGATGAGCTGGTGAAGAGTCCTCAAACAGCTTATTTAAGAACAATTACACCAAAGTACCAAACCATTGTTGATCTTTCAGTGATAGAAATATTGTCAAGGCATGCTTCTGATGAGGTCTACCTCGGAGAAAACAATGACCCAAATTGGACATCTGATTCGAAGGCATTACAAGCTTTCAAAAAGTTCGGAAAGAAGTTGGTAGAAATCGAAGAAAAAATCACTGCAAGGAATAGTGATCCAAATCTTAGAAACAGAACTGGGCCTGTTCATCTGCCTTACACTTTGCTCCTTCCCACTAGTAAGGAAGGGTTAACTTTCAGAGGAATTCCTAATAGTATCTCCATCTAG 2613 0.4148 MFSGVSGLINRGQKLKGTVVLMRKNVLDVNKAAGVTSDVTSGDVIRGLGGIIGGGIDVVTTVAGTTIDNLTSFLGRNVGLQLISATATDASGKGKVGKETFLEGIILSLPTLGAGQSAFDIHFEWDSNFGIPEAFYIRNYMQVEFFLVSLTLEDVPNQGTIRFVCNSWVNNFKSYEKDRIFFVNKTYLPSETPAALVKYREEELKTLRGNGKGERKEWERIYDYDVYNDLGKPDSGEKYARPILGGSSTHPYPRRVRTGRRPTRKDPNSESPGDSYIPRDENFGHLKSSDFLIYTLKSLSQAVLPALQSVIFGEFGSFDEVRGLQEGGIKLPTDVLSAISPLPALKEIFRTDGEQVLKFPPPHVINVSKSAWMTDEEFAREMIAGVNPCVIRLLQEFPVQSKLDATIYGDQTSKITKEQLEINLEGQTVEEALSFQRLFILDYNDAFIPYLRKINEFAKAYATRTILFLKDDGTLKPIAIELSLPHPNGDQFGSESKVILPATEGAESTIWLLAKAHVIVNDSCYHQLMSHWLNTHAVIEPFVIATNRNLSVLHPIYKLLYPHYRDTININGLARQSLINADGIIEQSFLPGPYSLEISSAVYKNWVFTDQALPADLIKRGLAIKDPSSPHGLQLLIKDYPYATDGLEIWDAINTWVREYVSLYYPTDEAIRKDAELQAWWKEAVEKGHADLKDKPWWPKLQNVEELIQSASIIIWTASALHAAVNFGQYPYGGYILNRPTISRRLIPEQGTPEYDELVKSPQTAYLRTITPKYQTIVDLSVIEILSRHASDEVYLGENNDPNWTSDSKALQAFKKFGKKLVEIEEKITARNSDPNLRNRTGPVHLPYTLLLPTSKEGLTFRGIPNSISI* 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0635 870 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 186 870 IPR013819 GO:0016702|GO:0046872
Lan5g0635 870 ProSitePatterns Lipoxygenases iron-binding region signature 2. 553 563 IPR020834 GO:0016702|GO:0046872
Lan5g0635 870 PANTHER LIPOXYGENASE 7 870 IPR000907 GO:0016702|GO:0046872
Lan5g0635 870 MobiDBLite consensus disorder prediction 237 280 - -
Lan5g0635 870 Gene3D - 504 869 - -
Lan5g0635 870 SUPERFAMILY Lipoxigenase 188 870 IPR036226 -
Lan5g0635 870 PRINTS Plant lipoxygenase signature 153 171 IPR001246 GO:0016491
Lan5g0635 870 PRINTS Plant lipoxygenase signature 179 200 IPR001246 GO:0016491
Lan5g0635 870 PRINTS Plant lipoxygenase signature 218 234 IPR001246 GO:0016491
Lan5g0635 870 PRINTS Plant lipoxygenase signature 251 270 IPR001246 GO:0016491
Lan5g0635 870 PRINTS Plant lipoxygenase signature 312 333 IPR001246 GO:0016491
Lan5g0635 870 PRINTS Plant lipoxygenase signature 357 373 IPR001246 GO:0016491
Lan5g0635 870 PRINTS Plant lipoxygenase signature 396 415 IPR001246 GO:0016491
Lan5g0635 870 PRINTS Plant lipoxygenase signature 461 485 IPR001246 GO:0016491
Lan5g0635 870 PRINTS Plant lipoxygenase signature 783 797 IPR001246 GO:0016491
Lan5g0635 870 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 13 187 IPR036392 GO:0005515
Lan5g0635 870 Gene3D - 188 286 - -
Lan5g0635 870 ProSitePatterns Lipoxygenases iron-binding region signature 1. 526 540 IPR020833 GO:0016702|GO:0046872
Lan5g0635 870 CDD PLAT_LH2 14 184 IPR042057 -
Lan5g0635 870 Pfam Lipoxygenase 196 853 IPR013819 GO:0016702|GO:0046872
Lan5g0635 870 Pfam PLAT/LH2 domain 89 182 IPR001024 GO:0005515
Lan5g0635 870 Gene3D - 287 370 IPR027433 -
Lan5g0635 870 ProSiteProfiles PLAT domain profile. 58 183 IPR001024 GO:0005515
Lan5g0635 870 PANTHER SEED LINOLEATE 9S-LIPOXYGENASE 7 870 - -
Lan5g0635 870 PRINTS Lipoxygenase signature 508 525 IPR013819 GO:0016702|GO:0046872
Lan5g0635 870 PRINTS Lipoxygenase signature 526 543 IPR013819 GO:0016702|GO:0046872
Lan5g0635 870 PRINTS Lipoxygenase signature 546 566 IPR013819 GO:0016702|GO:0046872
Lan5g0635 870 SMART LH2_4 13 184 IPR001024 GO:0005515
Lan5g0635 870 Gene3D PLAT/LH2 domain 4 187 - -
Lan5g0635 870 Gene3D - 371 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0635 Lan-Chr5 13329349 13342452 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0635 1 870 Acyl Lipid Metabolism Gene Families AT1G55020 55.655 0.0 991
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0635 K15718 - gmx:547694 1318.14