Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0617 ATGACAACCTATGGCACAATCTCAACCTCTCCAAACAACAAAAACAACAACAACCTAGAGTACATCTCACGCGCCAGACAAACTATCAAAGCCGGCTTAGGAACCCGCCGCCCATGGAAACTCATGTTCAACCACCGCTCCTTCAACGTCCCCACCGCCGTAACCGCCGCCGTATCACGTCTCCGTTTCAACCTCTCTTACTTCCGCATGAACTACGCCACCGTAGCACTCTTCATATTGTTCCTTAGTCTTCTATGGCACCCAATTTCTCTCATTGTTTTCATTCTCATTATGGCTGCATGGCTCTTTCTATACTTCCTTAGAGATCAACCACTTGTTCTTGTTGGACATGTTGTTGATGATCGTGTTGTACTTGTTGTCATGGCGGTGATCACGGTGGTGGTGCTGCTGCTGACACATGCTACGGTTAATATTATGGTGGCGGTTTCGGTTGGGGTGGTGGTTGTGGTGGTGCATGCGGTGTTCAGGAAGACGGAAAATTTGTATTTGGATGAAGAAGAAGAAGGGTTGCTCAACAATGCTGCTGCTTCTTGA 555 0.4775 MTTYGTISTSPNNKNNNNLEYISRARQTIKAGLGTRRPWKLMFNHRSFNVPTAVTAAVSRLRFNLSYFRMNYATVALFILFLSLLWHPISLIVFILIMAAWLFLYFLRDQPLVLVGHVVDDRVVLVVMAVITVVVLLLTHATVNIMVAVSVGVVVVVVHAVFRKTENLYLDEEEEGLLNNAAAS* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0617 184 Pfam PRA1 family protein 33 173 IPR004895 -
Lan5g0617 184 PANTHER PRENYLATED RAB ACCEPTOR 1-RELATED 2 175 IPR004895 -
Lan5g0617 184 PANTHER PRA1 FAMILY PROTEIN 2 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0617 Lan-Chr5 12597774 12598616 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0617 K20359 - jre:109007918 177.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0617 5 12597774 12598616 Lan2g0407 2 4241254 4241931 LSH
Lan6g2133 6 31814766 31815490 Lan5g0617 5 12597774 12598616 PCT
Lan10g0282 10 1829730 1830464 Lan5g0617 5 12597774 12598616 PCT
Lan3g0223 3 1440828 1441509 Lan5g0617 5 12597774 12598616 PCT
Lan5g0617 5 12597774 12598616 Lan6g2133 6 31814766 31815490 PCT
Lan5g0617 5 12597774 12598616 Lan10g0282 10 1829730 1830464 PCT
Lan5g0617 5 12597774 12598616 Lan3g0223 3 1440828 1441509 PCT