Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0611 ATGTCAGGAATAGTAGTGGTTTTTGATTTTGACAAGACTATTGTAGAATGTGACAGTGATAACTGGGTCATTGATGAATTGGGTTTCACTGATTTGTTCAATCAGCTTCTTCCAACCATGCCTTGGAATTCTCTCATGGATAGGATGATGATGGAACTTCATTCACATGGTATCACCATTGAAGAAATTGAAAAGGTTCTACATAGGATTCCTATTCATCCAAGAATAATACCTGCACTAAAATCAGCTCATGCTCTAGGGTGTGATATGAGGATTGTAAGTGATGCAAATATGTTCTTCATTGAGACAATTTTGAAGCACTTAGGAATAAAGGAATACTTTTCAGAGATTAACACTAACCCAGGTTATGTTAATGAAGAAGGAAGGTTAAGAATTTTGCCTTACCATGACTTTAACAAATCTCCACATGGCTGCACTTTGTGCCCTCCAAACATGTGCAAGGGTCTAATAATGGATAGAATCCAAGATTCAATGTCCAATGAAGATGAGAAGAGGTTGATATATCTTGGTGATGGTGCTGGTGACTATTGCCCAAGTTTAAGGCTTAAAGAGAGAGACTTTATGATGCCAAGGAAGAATTTTCCAGTTTGGGATTTGATATGTAAAAACCCTTTGCTGCTTAAGGCTGAAATTCATGGATGGAGTGATGGTGAAGAACAGGAACAAGTTTTATTGCATTTGATCAACAAAATTGAAATGGATAAAAATTCTCAGTTCATTTCATCAGATTGCAAGTTACAGATTCTATCTGTTTCTGATGCTTTGCCTAAAGTTCTCTCAGTTAGGCCATAA 813 0.3665 MSGIVVVFDFDKTIVECDSDNWVIDELGFTDLFNQLLPTMPWNSLMDRMMMELHSHGITIEEIEKVLHRIPIHPRIIPALKSAHALGCDMRIVSDANMFFIETILKHLGIKEYFSEINTNPGYVNEEGRLRILPYHDFNKSPHGCTLCPPNMCKGLIMDRIQDSMSNEDEKRLIYLGDGAGDYCPSLRLKERDFMMPRKNFPVWDLICKNPLLLKAEIHGWSDGEEQEQVLLHLINKIEMDKNSQFISSDCKLQILSVSDALPKVLSVRP* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0611 270 Pfam Putative Phosphatase 4 235 IPR016965 GO:0016791
Lan5g0611 270 Gene3D - 2 188 IPR023214 -
Lan5g0611 270 PANTHER PHOSPHATASE, ORPHAN 1, 2 1 268 IPR016965 GO:0016791
Lan5g0611 270 TIGRFAM DKMTPPase-SF: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 4 199 IPR006384 GO:0016791
Lan5g0611 270 PANTHER INORGANIC PYROPHOSPHATASE 1 268 - -
Lan5g0611 270 SUPERFAMILY HAD-like 4 188 IPR036412 -
Lan5g0611 270 PIRSF PLP_phosphatas_PHOSPHO2 1 239 IPR016965 GO:0016791
Lan5g0611 270 TIGRFAM HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 5 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0611 Lan-Chr5 12479720 12481434 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0611 K13248 - gmx:100785878 487.263