Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0584 ATGGATGCAAGTGAGGGAAATCCAAAATTCTCAGCATTCCCTTTCAAACCCTATTCCATTCAATTCGATTTCATGAATGCACTCTATCATTCTCTCAACCATGGCGGCGTTTCCATGTTGGAAAGCCCTACTGGTACTGGGAAAACTATGAGTGTTATCTGTAGTGCTCTGCAGTGGGTGGTTGATCGACGACGTCAACAGGAAGCAGGGTTTGTTTGGGGTAAGGATCAGGTGAATGATGGCGGGCTTGGTTCTGATGATGAACCTGATTGGATGAGAAACTTCGATGTCAACAAAGATGACCAAGTCAAAGAGGAAAAAATAAAAAATAAGAAGGATAAGTTTGGGTACAATAGTAAGAAGAAGAACAACAAGAATAGTTGTAAAGAGTCTCTTACTGCAAAGGGGTGTGAGAGTTTGGAAAAGAAAATTGAGACAGTGGATGTTAGTGATAAGGAGTTTTTACTGGAAGAGTATGAGAGTGAAGATGAGGATGATCCGTGCTGCGTGTCGTCGAAGAGGAGGGCTACTAAGAGTATCCTTACGTCGTCAAGTGAAGATGATTCTGATGAGGAGGAGGTGGAGGAGAAGAAATTCAAGGTTTACTTCTGTAGTCGAACACATTCGCAGCTTTCACAGTTCATAAAGGAGTTAAGGAAGACAGTTTTTGCAAGTGAGATGGATGTTGTGAGTTTAGGCTCCAGGAAAAATCTTTGCATTAATGAAGAAGTAATAGCACTTGGAAACTCCACACGTGTAAATGAGCGATGCTTGGAACTTCAGCAGAAAAAGAAAAATAAAGCTTCAAAAATTAAGAACTTAAAAGTAGGTGCTGGGGTACACAGAAAAAAGGCCTCTTCCGGTTGCCCAATGCTCAGAAAACGTAGCTTACAACGAGAATTCAGGAATGAGGCATCTCAAAGGGGGCCCTTGGATATTGAAGATCTTGCTAGCCTTGGAAGAACTTTGGGAACCTGTCCATACTACGGCTCTAGAAGCATGGTTTTGAAAGCTGATCTTGTTGTCCTGCCATATCAATCTCTTCTGTCAAAATCATCTCGTGAAGCACTAGGTCTGAATTTGAAATCAAATATTGTTATAATAGACGAAGCACATAATTTAGCTGATTCACTCATCAGCATGTATGACTCCAAAATTACTTTATCACAGCTAGAAAATGCTCATTGCCATTTGGAGCGGTACTTCATGAGATTCCGGAATCTTTTGGGACCTGCTAATCGGAGATACATTCAAACTCTGATGGTCCTCACACAAGCTTTCCTCCGAGTGCTGCACAGTGAGAAAGATGGAAATCTCGTAGGTTCTTGCCATTATATTGAACAGGCTTCTGAAGAAACTAGAGCCTCTGACTTCACGATGGCCATCAATGATTTTATTTTCGAGCTAAATGTAGACAATATCAACTTATTCAAATTGTTAAAGTATATAAAGGAAAGTAATGTCATGCACAAGGTTAATGGTTATGGAGAAAAGCTGTCTACCACGGAGAAGATGTCGGCACACAATAAAACAAGGGAAAATGGTGAGGAGGGAAGCTGTCAGTCCGCTTTCCAGGCATTAGCTAACATGTTGCAATCACTGACAAACAATGATAGTGATGGAAGGATAATCATTTCCAGGTCTAGACCAACGAGCTTAACGAAACACCAGGGATACATTAAATATGTTATGCTCAGTGGGGAGAAGCTTTTCTCCGAGATTGTAGATCAAGCACATGCTGTTCTATTAGTAGGGGGGACACTTCAACCTATAGAAGAAACAAGGGAGCGACTCTTTCCATGGCTACTGCCGAACCAGTTACATTTCTTCTCATGTGGTCATATTGTCCCTCCAGACAGCATTATGCCAATTGCAGTTTCCCGTGGTCCTTCTGGCCGCTCTTTTGATTTTAGCTACAGCTCCAGGAGCTCACCAGACATGATGCGAGAGCTGGGCCTTTTGCTATGTAATTTGGTGAATGTGGTTCCGGAAGGAATTGTAGTCTTCTTCCCTTCTTTTGATTACGAAGGTAAAGTATATGAAAACTGGAAGTCTTCTGGCATCCTTGAAAGGATTACAAAGAAGAAGCGTGTCTTTAGAGAGCCTAGAAACAATATGGACGTTGAATCTGTTCTCAAGGAATATAAAGATGTCATTTGTACATTGTCGAGCACGAATCCAGGAGTAAATCAAGCGTCACATACTGGTGCAATTCTCCTTGCTGTTGTTGGTGCGAAGTTATCGGAAGGGATCAACTTAAGTGATGGGATGGGTCGATGCATAATCATGGTTGGACTACCATATGCTAGCCCATCTGACATTGAGTTGTTGGAGCGGATAAAGCATATTGAAGGTTTTCGAAATTCAAAGTCCACTGAAAATCCTAGATTGTCTACGTGTAATGACATATACCATGGAGATGTACGAGGTGGTTTTGACATCTTAAGAAGTTGCAGCAATAGAGGAAAAGAGTACTATGAGAATCTCTGCATGAAAGCTGTAAATCAATCAATAGGTAGAGCAATCCGTCACATTAATGACTATGCAGCAATCTTGTTGGTTGACACAAGGTATGCAAGTGATTCATCAAAAAGGTCATTTTCCCACCCAGTCACTAAGCTCCCACAATGGATAAAAGATTGTCTTGTTTCTTCTACCAATAACTATGGTGAAGTTCATAGATTGGTGCACCAATTTTTCAAATCCAAAAAGACTTGCTGA 2721 0.412 MDASEGNPKFSAFPFKPYSIQFDFMNALYHSLNHGGVSMLESPTGTGKTMSVICSALQWVVDRRRQQEAGFVWGKDQVNDGGLGSDDEPDWMRNFDVNKDDQVKEEKIKNKKDKFGYNSKKKNNKNSCKESLTAKGCESLEKKIETVDVSDKEFLLEEYESEDEDDPCCVSSKRRATKSILTSSSEDDSDEEEVEEKKFKVYFCSRTHSQLSQFIKELRKTVFASEMDVVSLGSRKNLCINEEVIALGNSTRVNERCLELQQKKKNKASKIKNLKVGAGVHRKKASSGCPMLRKRSLQREFRNEASQRGPLDIEDLASLGRTLGTCPYYGSRSMVLKADLVVLPYQSLLSKSSREALGLNLKSNIVIIDEAHNLADSLISMYDSKITLSQLENAHCHLERYFMRFRNLLGPANRRYIQTLMVLTQAFLRVLHSEKDGNLVGSCHYIEQASEETRASDFTMAINDFIFELNVDNINLFKLLKYIKESNVMHKVNGYGEKLSTTEKMSAHNKTRENGEEGSCQSAFQALANMLQSLTNNDSDGRIIISRSRPTSLTKHQGYIKYVMLSGEKLFSEIVDQAHAVLLVGGTLQPIEETRERLFPWLLPNQLHFFSCGHIVPPDSIMPIAVSRGPSGRSFDFSYSSRSSPDMMRELGLLLCNLVNVVPEGIVVFFPSFDYEGKVYENWKSSGILERITKKKRVFREPRNNMDVESVLKEYKDVICTLSSTNPGVNQASHTGAILLAVVGAKLSEGINLSDGMGRCIIMVGLPYASPSDIELLERIKHIEGFRNSKSTENPRLSTCNDIYHGDVRGGFDILRSCSNRGKEYYENLCMKAVNQSIGRAIRHINDYAAILLVDTRYASDSSKRSFSHPVTKLPQWIKDCLVSSTNNYGEVHRLVHQFFKSKKTC* 907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0584 906 Gene3D - 633 874 IPR027417 -
Lan5g0584 906 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 382 IPR027417 -
Lan5g0584 906 PANTHER ATP-DEPENDENT DNA HELICASE DDX11-RELATED 9 892 IPR028331 -
Lan5g0584 906 Pfam Helicase C-terminal domain 655 870 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
Lan5g0584 906 SMART Cxpdneu3 673 860 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
Lan5g0584 906 SMART deadxpd 9 414 IPR006554 GO:0003678|GO:0016818
Lan5g0584 906 TIGRFAM rad3: DNA repair helicase (rad3) 152 889 IPR013020 GO:0003678
Lan5g0584 906 Gene3D - 14 71 IPR027417 -
Lan5g0584 906 SMART ultradead3 13 449 IPR014001 -
Lan5g0584 906 Pfam DEAD_2 203 391 IPR010614 GO:0003677|GO:0003678|GO:0005524
Lan5g0584 906 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-2 domain profile. 7 420 IPR014013 GO:0005524
Lan5g0584 906 Gene3D - 176 430 IPR027417 -
Lan5g0584 906 CDD SF2_C_XPD 619 858 - -
Lan5g0584 906 PANTHER DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER 9 892 IPR045028 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0584 Lan-Chr5 11761669 11767001 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0584 K11273 - gmx:106794132 1325.46