Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0576 ATGTCCTCTTCAAATTCTTGGACACAAATATTTCAGTGGTTAATGAAGCCAAAATTCTATACAAAATGCATATCCTATGTGAAGTTTATAAATATGAGGCTAGAGATAATCCAAAAGAAGAGGAAAGCAGTTCAGAAGTTTATGAAGAGTGACATTGCTGAACTTCTTAAGAATGGCCATGACTATAATGCATATACAAAGGTTGCAGAGCTTCTATTCGAGCAAAAATTGTTATCCTGCTATGAACTTATTGCAAAGTTTGTTGAATGCATATCAGATCATGTTGAAGAGCTGAGTAAAAATGGGGATTGTCCTGATGAATGCAAAGAAGCTATACCATCATTGATATATGCTGCAGCAAGATTTGCTGATTTGCCAGAATTGCGTGACTTCAGAACTTTGTTTACTGAGAAATTTGGGAATTCACTTGAACCTTATATAAATAAAGAGTTTGTTGAGAAGTTGAGCAGAGATCCTCCAACAAGAGAAATGAAGATTAAATTATTGTATGATATAGCACAAGAGTTCTCTATAGAGTGGGATGATAAGGCTTTGGAGAAAACACTTTATGCACAATCTCTACATGGAGAGAGGCCTAAGGTTGATAAACACAGAGATGAAAGTGATTACAATAAGTCTAAAGGAAAAGAAAGAAACACTACCTCTCAAGGAAAGAAGGATTTCAATGGTGAAACATGGATTCAACAAAGCAGTAGTGAAGATGAAGCAAGTACAGATATGTCATCAATGGATGGCACAAAATCTAGTTCAATTTCATTGGGAAGCACTTCTGATGATGAAGTACAAATTAAGAGCCCATCTTCCTATTGGCTTATTCCACCACCTTACCGAAAACAAAATACAATAGATAGAGGTAAAAACAATTTAATGAAATGCAACAGAAAGGGTAAAAGATCATATGTGAGAGGTACATCTCTTCCTACTGAACCCACAAATGCAGTAGAAACATCAACATGGCATGCAAGAAAAATGTCCTTAGATCAAGAGTTCAAGGTTGGTAGAGGGCGTGTGCATCCTAATCTACCGGAGGATTATGATGACTTGGCAGCTCGTGTTGCCGCTCTCAGAGGGAGATAA 1098 0.367 MSSSNSWTQIFQWLMKPKFYTKCISYVKFINMRLEIIQKKRKAVQKFMKSDIAELLKNGHDYNAYTKVAELLFEQKLLSCYELIAKFVECISDHVEELSKNGDCPDECKEAIPSLIYAAARFADLPELRDFRTLFTEKFGNSLEPYINKEFVEKLSRDPPTREMKIKLLYDIAQEFSIEWDDKALEKTLYAQSLHGERPKVDKHRDESDYNKSKGKERNTTSQGKKDFNGETWIQQSSSEDEASTDMSSMDGTKSSSISLGSTSDDEVQIKSPSSYWLIPPPYRKQNTIDRGKNNLMKCNRKGKRSYVRGTSLPTEPTNAVETSTWHARKMSLDQEFKVGRGRVHPNLPEDYDDLAARVAALRGR* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0576 365 MobiDBLite consensus disorder prediction 196 267 - -
Lan5g0576 365 MobiDBLite consensus disorder prediction 225 267 - -
Lan5g0576 365 Pfam Regulator of Vps4 activity in the MVB pathway 27 178 IPR005061 GO:0015031
Lan5g0576 365 Gene3D - 13 188 IPR042277 -
Lan5g0576 365 PANTHER IST1 FAMILY MEMBER 17 364 IPR005061 GO:0015031
Lan5g0576 365 PANTHER REGULATOR OF VPS4 ACTIVITY IN THE MVB PATHWAY PROTEIN 17 364 - -
Lan5g0576 365 MobiDBLite consensus disorder prediction 196 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0576 Lan-Chr5 11674171 11676154 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0576 - - lang:109330550 730.324