Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0567 ATGTTCTATGGTGCAGTGGTTTGGGACCCTTGGCTTATTGTTGGTCAAATTGTTTGTCTTCAATGCTTATACTATATCACTCTTGGAATGTTCTTATCCTTACTTGTTGGAACTCGAGTTTCGCGAATGAGCCTTGTGTATTTCTTTGATTATGTTACTATCACTACCTCTACCATTACTGGTTGGTGTGTTATTGCTTCATTTCTGTTCAGCTCACTTGCAGGGGCTGTATATATGCTTTATTTGATTGAACGAGCAAAGAAGTGCTTGGATTTTTCTGCGACTCTCTACATCATTCATCTTTTTATATGCATTGTGTTTGGGGGTTGGCCCTCTTCTATAACATGGTGGATTGTAAATGGTACTGGAATTGCAGTGATGGCTTTGCTAGGTGAGTATCTGTGCATCAAGCGTGAACTCCGGGAGATACCAATTACACGATATCGTTCAAATGTTTGA 459 0.3987 MFYGAVVWDPWLIVGQIVCLQCLYYITLGMFLSLLVGTRVSRMSLVYFFDYVTITTSTITGWCVIASFLFSSLAGAVYMLYLIERAKKCLDFSATLYIIHLFICIVFGGWPSSITWWIVNGTGIAVMALLGEYLCIKRELREIPITRYRSNV* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0567 152 PANTHER PROTEIN SYS1 HOMOLOG 1 152 - -
Lan5g0567 152 PANTHER SYS1 1 152 IPR019185 -
Lan5g0567 152 PIRSF SYS1_homolog 1 152 IPR016973 GO:0000139
Lan5g0567 152 Pfam Integral membrane protein S linking to the trans Golgi network 5 144 IPR019185 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0567 Lan-Chr5 11339481 11342574 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0567 K20318 - tcc:18595890 291.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0567 5 11339481 11342574 Lan9g0686 9 10038656 10040849 LSH
Lan5g0567 5 11339481 11342574 Lan2g0446 2 4835841 4838597 LSH