Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0556 ATGAGCCATGCACAGTTTCATATGGGCTCTGGTAGTAGAACTGCTCCAAGAACTTTAGAGTTTGGGAAGACACATGTAGTGAGGCCCAAAGGAAAACATGAAGCCACAATAGTTTGGCTGCATGGTCTTGGTGATAATGGTTTGAGCTCATCTCAGCTCTTGGAATCCCTTCCACTTCCAAATATTAAATGGATTTGCCCAACTGCTCCTACTCGTCCTGTAGCAATACTTGGTGGTTTTCCTTGCACTGCATGGTTTGATATGGGAGAAATTTCAGAAGATGGTGTAAATGATTGGGAAGGTTTAGATGCTTCAGCAGCACACATTGCGAACTTGTTGTCAACAGAGCCAGCTGATGTGAAAGTTGGAGTTGGAGGGTTCAGTATGGGTGCTGCAATGGCCCTACACTCAGCAACTTGTTTTGCTATAGGAAAGTATGGAAATGGCATTCAATACCCTATCAACTTAAGAGCTGTTGTTGGACTAAGTGGTTGGGTTCCAGGATCAAGGACCTTAAGGAACAAAATAGAAGTGTCATATGAAGCAAGAAGGAGAGCAGCTTCATTACCCATTTTGCTGAGTCATGGAATCAGTGATGATGAAGTACTCTACAAATATGGAGAGAAATCAGCCCAATCCTTAAGTTCAGCAGGGTTTCACTATATTACATTCAAATCCTATGAAGGGCTTGGTCATTACACAGTTCCTAGAGAGATGATTGATGTCTCCAATTGGCTCAACTCAAGGTTGGGGTTTGAGGGATCCTCATAA 771 0.4293 MSHAQFHMGSGSRTAPRTLEFGKTHVVRPKGKHEATIVWLHGLGDNGLSSSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDMGEISEDGVNDWEGLDASAAHIANLLSTEPADVKVGVGGFSMGAAMALHSATCFAIGKYGNGIQYPINLRAVVGLSGWVPGSRTLRNKIEVSYEARRRAASLPILLSHGISDDEVLYKYGEKSAQSLSSAGFHYITFKSYEGLGHYTVPREMIDVSNWLNSRLGFEGSS* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0556 256 SUPERFAMILY alpha/beta-Hydrolases 25 250 IPR029058 -
Lan5g0556 256 Pfam Phospholipase/Carboxylesterase 24 247 IPR003140 GO:0016787
Lan5g0556 256 Gene3D alpha/beta hydrolase 16 251 IPR029058 -
Lan5g0556 256 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 255 - -
Lan5g0556 256 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0556 Lan-Chr5 11147162 11151467 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0556 1 255 Acyl Lipid Metabolism Gene Families AT3G15650 71.321 2.07e-125 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0556 K06130 - gmx:100782153 460.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g2073 6 31344777 31349406 Lan5g0556 5 11147162 11151467 PCT
Lan10g0218 10 1366626 1370922 Lan5g0556 5 11147162 11151467 PCT
Lan5g0556 5 11147162 11151467 Lan6g2073 6 31344777 31349406 PCT
Lan5g0556 5 11147162 11151467 Lan10g0218 10 1366626 1370922 PCT