Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0554 ATGGCATTCTCTTCAACAACAACAACTTCTTCTCTTAACTTCACCACTTTCACTTCTTTCCCACACAACAAAATCTCTTCTTTTTCTCACTCTCTTTCATTCCCCTTTTCAAAACAAAACCTATCTTTCTCTTCCCATTTTACCCTTCCACCTACCCCACGCGCCCACGCGCCTACCAATGCCACCGCACCTCCCTCCTCCACCTCCTCCTTCCACGGCCTCTGCTACGTCGTCGGCGACAACATCGACACCGATCAAATCATCCCCGCCGAATACCTAACCCTAGTTCCTTCAAAACCCGACGAGTATGAGAAACTCGGTTCCTTCGCCATGATCGGACTTCCGGCGAGTTACACCGCCCGGTTCGTCGAGCCTGGCGAGACCAAAACCAAATACTCCGTGATTATCGCCGGAGCTAACTTCGGCTGCGGCTCCTCACGCGAGCACGCGCCGGTTGCGCTCGGCGCGTCGGGATCGGCTGCGGTGGTGGCGGAGTCGTATGCGAGGATATTTTTCAGGAACTCGGTGGCGACGGGGGAAGTGTATCCGATTGAATCGGAGGTGAGGTTGTGTGAGGAATGTAGGACTGGAGATGTGGTTACAATTGAGCTTGAGGAGAGTAGGTTGGTTAATCATACCACCGGGAAGGAGTATCGGTTGAAGCCGATCGGGGACGCGGGGCCGGTGATTGAAGCTGGTGGGATATTTGCTTTTGCTAGGAAGACTGGAATGATTCCAACTCGTTGA 747 0.5328 MAFSSTTTTSSLNFTTFTSFPHNKISSFSHSLSFPFSKQNLSFSSHFTLPPTPRAHAPTNATAPPSSTSSFHGLCYVVGDNIDTDQIIPAEYLTLVPSKPDEYEKLGSFAMIGLPASYTARFVEPGETKTKYSVIIAGANFGCGSSREHAPVALGASGSAAVVAESYARIFFRNSVATGEVYPIESEVRLCEECRTGDVVTIELEESRLVNHTTGKEYRLKPIGDAGPVIEAGGIFAFARKTGMIPTR* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0554 248 CDD IPMI_Swivel 77 204 IPR033940 -
Lan5g0554 248 PANTHER BNAA05G34440D PROTEIN 34 247 - -
Lan5g0554 248 Pfam Aconitase C-terminal domain 132 179 IPR000573 -
Lan5g0554 248 TIGRFAM LEUD_arch: 3-isopropylmalate dehydratase, small subunit 75 241 IPR011827 GO:0016836
Lan5g0554 248 SUPERFAMILY LeuD/IlvD-like 71 245 - -
Lan5g0554 248 Gene3D Aconitase, domain 4 68 244 IPR015928 -
Lan5g0554 248 PANTHER 3-ISOPROPYLMALATE DEHYDRATASE SMALL SUBUNIT 2-RELATED-RELATED 34 247 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0554 K01704 - gmx:100809737 327.02