Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0540 ATGAACAAAATGAGTTTTATTGGAGGAGTTATGACAATATTAATGGTTCTACAATGCACAGAGGCAGTGACAGTTCATGTAGTTGGAGATGGTTTGGGTTGGACAGTTCCAGAAGATATATCTGCATACCAAACTTGGGCTTCTATCAATAATTTTGCACTTGGTGATATTTTATCATTCAATTTTGAGACAAATAGGCATGATGTAGCAGAAGTACCAAAAGGGTCCTATGAATCATGCACTTCAAACAACACAATAGGTACAATCATCACAACTGGTCCCACAAACATAACCCTCAATAGATCAGGTGAACATTTCTATATTTGCACCATTGGTCAACACTGTATTAATGGCCAAAAACTAGCCATCAATGTCTCCGCCACTCCCTCCACCGGAGCTCTTCCACCATCCACCGGAGCTCTTCCACCTTCTACCACCACCACCCCACCACCTCCATTTTCTGCAGCCAGTGGCAGTGCTTTAGCTAGTGTTGTTTTGCTCTTATTCTCATTGTTCTTGGGTGTAGCATTTTAG 534 0.4176 MNKMSFIGGVMTILMVLQCTEAVTVHVVGDGLGWTVPEDISAYQTWASINNFALGDILSFNFETNRHDVAEVPKGSYESCTSNNTIGTIITTGPTNITLNRSGEHFYICTIGQHCINGQKLAINVSATPSTGALPPSTGALPPSTTTTPPPPFSAASGSALASVVLLLFSLFLGVAF* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0540 177 MobiDBLite consensus disorder prediction 133 152 - -
Lan5g0540 177 PANTHER UMECYANIN-LIKE 7 149 - -
Lan5g0540 177 PANTHER BLUE COPPER PROTEIN 7 149 IPR039391 GO:0009055
Lan5g0540 177 SUPERFAMILY Cupredoxins 24 125 IPR008972 -
Lan5g0540 177 Pfam Plastocyanin-like domain 34 119 IPR003245 GO:0009055
Lan5g0540 177 ProSiteProfiles Phytocyanin domain profile. 24 127 IPR003245 GO:0009055
Lan5g0540 177 Gene3D - 24 134 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0540 Lan-Chr5 10874360 10876136 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0540 26 142 Miscellaneous Gene Families AT5G20230 43.590 6.96e-29 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0540 - - cit:102621423 149.443