Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0539 ATGAAGGGAGAATTTATAGTGCAAGATGGGTATGTGGTTAAGGAAGAGACTCACCTAACAGTGTTAAAAACTTGTTTGTTCTTTGCTGGAGATGGGTTCAAAGTGTATGATTGCAAGGGCCAACTCGTTTTCCGAGTTGACTCGTATGGACCTAACACTTGTGACAAGGACGAGGTTGTTCTTATGGATCCACGAGGCCATTGTCTTCTTACCCTCTGCCCAAAGAAACCGAGTCTGCATCAACGGTGGGAAGGGTTCAAAGGCGAGAGAATGAACGGTGATAAACCAATTTTCAGCGTGAAGAAATCATCCATCATCGAACGGTCACAAACGAGCATCACAGTAGAGGTGTACGATAACTCCAGTGTGGAGTACCACATCGAAGGGTGCTTCTCACAACGACGCTGCAAAGTTTTCAACACTGTGAAGAAGAAATCAATGGTTGAGATTCATCGTAAAGTGGACCCCACGACAGGTGTCATGCTTGGGAAAGAAGTGTTCTCGCTTTGCGTTAAGCGTGGTTTTGATATGGTGTTTGCCATGGGATTAGTTTTGGTTCTTGATCAAATCAACGGTGAAAATTACTTTGATAGTGTAACTACGAAGGTTGTTGTGCACCCAATTGTAGAGGATTATAGAGTAAATCAACTTAGCCTTAGTAATCCTTGGAGTTTGAAGTCTATTAGAGGAAGGATTCCTTATTGCACTTTTATTAGGGATCTTGTAAACTTTATATGCATAAAAGATAGGATTTAA 756 0.418 MKGEFIVQDGYVVKEETHLTVLKTCLFFAGDGFKVYDCKGQLVFRVDSYGPNTCDKDEVVLMDPRGHCLLTLCPKKPSLHQRWEGFKGERMNGDKPIFSVKKSSIIERSQTSITVEVYDNSSVEYHIEGCFSQRRCKVFNTVKKKSMVEIHRKVDPTTGVMLGKEVFSLCVKRGFDMVFAMGLVLVLDQINGENYFDSVTTKVVVHPIVEDYRVNQLSLSNPWSLKSIRGRIPYCTFIRDLVNFICIKDRI* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0539 251 PANTHER - 6 204 IPR007612 -
Lan5g0539 251 Pfam LURP-one-related 6 186 IPR007612 -
Lan5g0539 251 PANTHER LURP-ONE-LIKE PROTEIN 6 204 - -
Lan5g0539 251 Gene3D - 4 195 IPR038595 -
Lan5g0539 251 SUPERFAMILY Tubby C-terminal domain-like 6 191 IPR025659 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0539 Lan-Chr5 10869821 10871206 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0539 - - lang:109347772 518.464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g2063 6 31286329 31288191 Lan5g0539 5 10869821 10871206 PCT
Lan3g0138 3 938569 939645 Lan5g0539 5 10869821 10871206 PCT
Lan5g0539 5 10869821 10871206 Lan6g2063 6 31286329 31288191 PCT
Lan5g0539 5 10869821 10871206 Lan3g0138 3 938569 939645 PCT