Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0513 ATGTTCTGGAAGAAAAGTTCTCAAAACGACATCGTTTTGGGTTCTGGATCAGTACCAGTGTACCTGAATGTTTATGATCTTGCATCTATCAATGGTTGTGCTTATTGGGCTGGCCTTGGAATTTATCACTCTGGTGTTCAAGTGCATAGTGTTGAATATGCATTTGGGGCACATGAGTCCCCATCATCAGGGATATATGAAGGGACACCAAAGAGATCTGAAAAGTTTAGGTTAAGAAAATCTATATTGATTGGTAAAACAAATATGGGATATAGTGAAGTGAAAGATTTGATGAAAGAATTTGGTACTCATTATAGAGGGAATGCTTATCATTTGATCACAAAAAATTGCAACCATTTTTGCAATGATGTTTGTGTTAAGCTCACTGGAAATCATATTCCTAGTTGGGTCAATCGTCTTGCCCGAATTGGGTTAATGTTGACTTGTATTCTTCCTGTGTCATTGAAATCAACTAAACTTAGAGATCATAAAATAGAAGACAATCAAATGCAACATGAAGGAAAGAAACAAGTATTAACTTGTGACTCCAACAACGTTATCGCTTTTAACTCAACTTTCTTTTCTGCTCCTTCTCCATTACTTACATCCGAAAATGCATACAGGGGAAGAAATAGAATCACACGTCACATTTCTCTACCTTTGATTGAGTATTCATCTTGA 681 0.3612 MFWKKSSQNDIVLGSGSVPVYLNVYDLASINGCAYWAGLGIYHSGVQVHSVEYAFGAHESPSSGIYEGTPKRSEKFRLRKSILIGKTNMGYSEVKDLMKEFGTHYRGNAYHLITKNCNHFCNDVCVKLTGNHIPSWVNRLARIGLMLTCILPVSLKSTKLRDHKIEDNQMQHEGKKQVLTCDSNNVIAFNSTFFSAPSPLLTSENAYRGRNRITRHISLPLIEYSS* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0513 226 ProSiteProfiles PPPDE domain profile. 18 155 IPR008580 GO:0008233
Lan5g0513 226 PANTHER F23A5.4 PROTEIN 6 223 - -
Lan5g0513 226 Pfam PPPDE putative peptidase domain 19 152 IPR008580 GO:0008233
Lan5g0513 226 SMART DUF862_2a 18 156 IPR008580 GO:0008233
Lan5g0513 226 Gene3D PPPDE domains 15 173 IPR042266 -
Lan5g0513 226 PANTHER DESUMOYLATING ISOPEPTIDASE 6 223 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0513 Lan-Chr5 10555535 10557834 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0513 K22763 - jre:109012072 262.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0513 5 10555535 10557834 Lan9g0606 9 8756625 8759522 LSH
Lan5g0513 5 10555535 10557834 Lan2g0610 2 9987775 9990470 LSH