Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0507 ATGGACTACAGCTCTGAAGAGGACTCAGATATCAGCGAATCTGAGATTGAAGACTATGCACAGAAACCATACGAACAGATAAAGGCTGGGAAGTACAAGGTCAAAAGTCTAAATGGCTCTCTTAGATGTCCTTTCTGTGCTGGAAAGAAGAAACAAGATTACAAATTTAAAGATTTATATCAACATGCATCAGGAGTGGGTAAGGGTTCTGCAAACAGAAGTGCCAAACAAAAGGCAAATCACCTTGCCCTAGCAAAGTATATGGAGATTGACCTAGCCAGTGAAGCAGAGGAAACCCAAGTCCCAGATCATTTGCCCCAAGCTATCAATCAGCCTCTACCGCAAGATGAACTTTATGTCTGGCCCTGGATGGGCATAATTGTTAATGTACAGATTAAATCAGATCATTCTAGCTATTGGTTGAATGAATTTGCTAAATTCAAACCGATAGATGCTCATATCTTATTGAACGAGGGAGATCCGGTTTCTCAATCTGTAATGCACTTTCATAACGACTGGAATGGTTTCATGAATGCCAGTGAATTTGAGAAATTATTTGAAACTTCACACCATGGTAAAAAAGATTGGAATTCAAGAAAGTTGCAGGCAGACTCAAACATTTATGGATGGGTTGCACGTAAAGAGGATTATGAATGCGAAGGACCAATGGGGGAATACCTCCGTGAGAAAGGAAAATTGAGGACAGTTACTGCTATTGTTCAAGAAGCGTCTGAAAGCAGAAACAGTGTTGTGGCAAACCTTGCTATTCAAATTGATGAAACAAATGAAAACCTCAATAAAATGCAGTACAAGTACAATGAAAAGAATATGTCATTGAGTAGGATGCTTGAAGACAAAGACAGACTTCACAGTGCTTTTGTTGAAGAATCAAGGAACATGCAGCGCAGAGCTCGTGATGAGGTGCGGAGGATCTTGGAAGAACAAGAAAATTTGAGCAGTGAATTGGAGGAAAAAAAGCGGAAGCTTGACTCCTGGAGTCGAGATCTGAACAAACGGGAGGTGATAACTGATCAAGAGAGGCAGAAACTTGAAGAGGACAGGAAGAAGAAAGATTTGAGGAATGAGTCACTCCAGTTGGCTTCAAAGGAGCAAAAGATAGCTGATGAGAATGTCCTAAAGCTTGTTGAAGAGCAAAAGAGAGAGAAAGAGGAAGCTTTACAGAAGATTATTCAGTTGGAAAAACAGCTAGACGCCAAACAGAAGTTGGAAATGGAAATTGAAGAGTTAAAAGGGAAACTGCAAGTTATGAAGCATCTTGGAGATGAAGATGATGCAGCGGTCCAGAACAAAATGAAAGAAATGAATGATGAGCTGCTAGAAAAACAGGAAAACTTAGAAAGTATGGAGCACATAAACAATACCCTCATTACCAAGGAGCGCCAGAGCAATGATGAACTACAGAAAGCTCGTAAAGAATTGATTGAGGGGTTAAACGAATTGCTGAATGGTCCTCGAACTAATATTGGGCTCAAGAGAATGGGAGAGCTTGATAATAAGGTCTTTTTAGATGCCTGCAAGAGAAAATTTCCTCTTGAAGATGCTGGGACAAAGGGTGCAGTGCTTTGTTCTTTGTGGCAGGAGAATGTAAAGAATTCAGCCTGGCATCCATTTAAAGTGGTCAAAGTGGATGATAAACTAAAGGAAATTATAAATGAGGAAGACGAGAAGTTGCATGATCTCAAACAGGAATGGGGAGATGAGATATATTCAGCTGTTGTTACAGCCTTGAAAGAATTAAAGGAATACAATGCAAGTGGTGGGTATACTGTTAATGAGCTATGGAACTTCAAGGAAAAAAGGAAGGCTACATTGAAAGAGGTTATCAGTTATATCGTGGAGCATATCAAGCCACTTAAGCGCAGGAGAACATAG 1893 0.401 MDYSSEEDSDISESEIEDYAQKPYEQIKAGKYKVKSLNGSLRCPFCAGKKKQDYKFKDLYQHASGVGKGSANRSAKQKANHLALAKYMEIDLASEAEETQVPDHLPQAINQPLPQDELYVWPWMGIIVNVQIKSDHSSYWLNEFAKFKPIDAHILLNEGDPVSQSVMHFHNDWNGFMNASEFEKLFETSHHGKKDWNSRKLQADSNIYGWVARKEDYECEGPMGEYLREKGKLRTVTAIVQEASESRNSVVANLAIQIDETNENLNKMQYKYNEKNMSLSRMLEDKDRLHSAFVEESRNMQRRARDEVRRILEEQENLSSELEEKKRKLDSWSRDLNKREVITDQERQKLEEDRKKKDLRNESLQLASKEQKIADENVLKLVEEQKREKEEALQKIIQLEKQLDAKQKLEMEIEELKGKLQVMKHLGDEDDAAVQNKMKEMNDELLEKQENLESMEHINNTLITKERQSNDELQKARKELIEGLNELLNGPRTNIGLKRMGELDNKVFLDACKRKFPLEDAGTKGAVLCSLWQENVKNSAWHPFKVVKVDDKLKEIINEEDEKLHDLKQEWGDEIYSAVVTALKELKEYNASGGYTVNELWNFKEKRKATLKEVISYIVEHIKPLKRRRT* 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0507 630 Coils Coil 379 426 - -
Lan5g0507 630 Pfam XS domain 116 218 IPR005380 GO:0031047
Lan5g0507 630 Gene3D XS domain 113 273 IPR038588 -
Lan5g0507 630 Coils Coil 251 271 - -
Lan5g0507 630 Coils Coil 342 367 - -
Lan5g0507 630 Pfam XH domain 498 628 IPR005379 -
Lan5g0507 630 PANTHER RIBONUCLEASE P SUBUNIT P38 4 630 IPR045177 GO:0080188
Lan5g0507 630 Coils Coil 550 570 - -
Lan5g0507 630 CDD RRM_like_XS 119 217 IPR005380 GO:0031047
Lan5g0507 630 PANTHER FACTOR OF DNA METHYLATION 1-RELATED 4 630 - -
Lan5g0507 630 Coils Coil 431 490 - -
Lan5g0507 630 Coils Coil 294 335 - -
Lan5g0507 630 Pfam XS zinc finger domain 43 85 IPR005381 GO:0031047
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0507 Lan-Chr5 10503882 10530342 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0507 - - gmx:100798940 993.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0507 5 10503882 10530342 Lan2g0607 2 9946153 9951932 LSH