Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0493 ATGGCTGGTGTAGCTGCTTCTGGTGTTGTTGGTGGAAATGGTTCTTCTTCATCTTCTTCATGGATGAAACTAAGAGGAAGAAGAGAAATGAGTAACAAGGTGAATAGGGTTAAGATTTCTTGTTCTTATTCTTCTTCTTCTTCTGTGATGGATCCTTATAAGACATTAAGGCTTCAATCTGATGCATCTGAATCTGAGGTTAGGAAAGCTTTCAGACAACTTGCTTTGCAGTATCATCCAGATGTATGCAAAGGGAGCAATTGTGGGGTGCAGTTTCACCTAATCAATGAAGCTTATGATGTTGTGATGGCGAATTTGAGAGGAGAATCAAAAGAGAGAGAAGTGTATGAAGAAGCATATGATGTAGGAATTGATGAGCCACTAAGGGGAATGAATGATCCAGATTGGGATATGTGGGAAGAGTGGATGGGTTGGGAAGGTGCAGGGATTCGTGACTACTCATCTCATATTAATCCGTATATTTGA 486 0.4033 MAGVAASGVVGGNGSSSSSSWMKLRGRREMSNKVNRVKISCSYSSSSSVMDPYKTLRLQSDASESEVRKAFRQLALQYHPDVCKGSNCGVQFHLINEAYDVVMANLRGESKEREVYEEAYDVGIDEPLRGMNDPDWDMWEEWMGWEGAGIRDYSSHINPYI* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0493 161 MobiDBLite consensus disorder prediction 10 25 - -
Lan5g0493 161 Gene3D DnaJ domain 23 111 IPR036869 -
Lan5g0493 161 PANTHER CO-CHAPERONE PROTEIN DJLA 5 161 - -
Lan5g0493 161 PANTHER HEAT SHOCK PROTEIN BINDING PROTEIN 5 161 - -
Lan5g0493 161 PRINTS DnaJ domain signature 53 71 IPR001623 -
Lan5g0493 161 PRINTS DnaJ domain signature 71 86 IPR001623 -
Lan5g0493 161 PRINTS DnaJ domain signature 87 107 IPR001623 -
Lan5g0493 161 SMART dnaj_3 50 107 IPR001623 -
Lan5g0493 161 ProSiteProfiles dnaJ domain profile. 51 120 IPR001623 -
Lan5g0493 161 CDD DnaJ 51 101 IPR001623 -
Lan5g0493 161 Pfam DnaJ domain 51 103 IPR001623 -
Lan5g0493 161 MobiDBLite consensus disorder prediction 1 29 - -
Lan5g0493 161 SUPERFAMILY Chaperone J-domain 47 149 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0493 Lan-Chr5 10352356 10354179 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0493 - - gmx:100780336 213.001
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0493 5 10352356 10354179 Lan9g0592 9 8655399 8657564 LSH