Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0301 ATGACGCTTGGTTCAGGAGGATCCAGTGTTGTGGTTCCAAGGAACTTCAGATTGCTCGAGGAACTTGAACGGGGAGAGAAAGGGATTGGAGATGGTACTGTTAGTTATGGAATGGATGATGGTGATGACATATACATGCGCTCTTGGACTGGAACCATTATTGGCCCCCATAATACTGTACATGAAGGAAGAATTTATCAATTGAAGCTGTTTTGTGATAAAGACTATCCAGAAAAGTCTCCAAGTGTTCGATTTCATTCACGGATCAATATGACTTGTGTTAATCATGAAACTGGAGTGGTTGAACCGAAGAAATTTGGTCTTCTTGCAAACTGGCAAAGAGAGTACACAATGGAGGACATACTGACTCAACTGAAGAAGGAAATGGCAGCTCATCATAATCGGAAGCTTGTTCAGCCTCCAGAAGGTACCTACTTTTAG 441 0.4218 MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKSPSVRFHSRINMTCVNHETGVVEPKKFGLLANWQREYTMEDILTQLKKEMAAHHNRKLVQPPEGTYF* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0301 146 Pfam Ubiquitin-conjugating enzyme 43 127 IPR000608 -
Lan5g0301 146 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 VARIANT 1D 10 140 - -
Lan5g0301 146 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 13 146 IPR000608 -
Lan5g0301 146 SMART ubc_7 16 144 - -
Lan5g0301 146 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 10 140 - -
Lan5g0301 146 Gene3D Ubiquitin Conjugating Enzyme 4 146 IPR016135 -
Lan5g0301 146 SUPERFAMILY UBC-like 11 146 IPR016135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0301 Lan-Chr5 4598061 4601071 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0301 K10704 - pvy:116143857 298.901