Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0292 ATGCGGGGGAAAAGGAGGAGAAAATTGAAACTGTTAAATGATGCAATCACTGACAGTAGAAGAACAGGAACTGAGGTGAAGAATGAAAAACTGGAGCTGCAAACTTGGTCTGATCTCCCTGTTGAACTCTTAGAATTAATCTTTTCCCGTTTAACCCTAGACAATAATATCCGTGCATCTGCTGTTTGCAAGAGTTGGCATTCTGTTGCCACTGCTGTACGTGTGTTAAATCAATCACCATGGCTTATGTATTTTCCAAAATTTGGTGATTGGTATGACTTCTATGACCCTGTGCATCGTATTACCTATTCCCTTCAGTTGCCAGAGTTAAGTGGATCTAGAGTTTGTTACACAAAAGATGGTTGGTTACTGCTATACCGACCTAGAACTCACCGAGTGTTTTTTTACAACCCCTTTACTCGGCAGGTGATCAAACTGCCAAGATTTGAGATGACATACCAGATAGTTGCCTTCTCTTGTGCACCAACGTCGTCTGATTGTGTTCTCTTTACGGTGAAGCATGTTAGTCCTACTGTTGTGGCCATTAGCACATGTTACCCTGGGGCAACAGAATGGGCCACTGTTAATTATCAAAACCGCTTGCCCTTTGTCAGTAGCATATGGAATAAGCTTGTGTTTTGTAATGGACTCTTTTATTGTCTGAGCCTCACAGGTTGGCTAGGGGTGTTTAACCCAGCTGAGCGCACTTGGAGTGTTCTGTCAGTACCTCCACCCAAATGCCCACAGAATTTTTTTGCCAAAAATTGGTGGAAGGGGAAATTTATGACAGAGCAAGACGGAAATATTGTAGTTATTTATACATGTTCTAGTGAAAACCCCATTATCTTTAAGTTAGATCCGACATTAATGCAATGGGAAGAGATGATAACACTAGATGGAGTAACTCTTTTTGCTAGTTTCCTGTCTTCTCATTCAAGAACTGACCTCCCTGGAAATATGAGAAATAATGTTTACTTCTCTAAAGTTCGATTTTATGGAAAGCGATGCATATCGTTCTCTCTTGATGACTGTAGATACTATCCGCGTAAGGAGTGGCATGACTGGGGAGAACAAGACCCTTTTGAAAACATATGGATTGAACCACCACAAAACTTCTCTGGGTTCACATGA 1131 0.4129 MRGKRRRKLKLLNDAITDSRRTGTEVKNEKLELQTWSDLPVELLELIFSRLTLDNNIRASAVCKSWHSVATAVRVLNQSPWLMYFPKFGDWYDFYDPVHRITYSLQLPELSGSRVCYTKDGWLLLYRPRTHRVFFYNPFTRQVIKLPRFEMTYQIVAFSCAPTSSDCVLFTVKHVSPTVVAISTCYPGATEWATVNYQNRLPFVSSIWNKLVFCNGLFYCLSLTGWLGVFNPAERTWSVLSVPPPKCPQNFFAKNWWKGKFMTEQDGNIVVIYTCSSENPIIFKLDPTLMQWEEMITLDGVTLFASFLSSHSRTDLPGNMRNNVYFSKVRFYGKRCISFSLDDCRYYPRKEWHDWGEQDPFENIWIEPPQNFSGFT* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0292 376 SMART fbox_2 39 79 IPR001810 GO:0005515
Lan5g0292 376 Pfam F-box-like 36 71 IPR001810 GO:0005515
Lan5g0292 376 PANTHER OS09G0392200 PROTEIN 6 372 IPR044619 -
Lan5g0292 376 SUPERFAMILY F-box domain 32 139 IPR036047 GO:0005515
Lan5g0292 376 ProSiteProfiles F-box domain profile. 33 84 IPR001810 GO:0005515
Lan5g0292 376 Gene3D - 35 74 - -
Lan5g0292 376 PANTHER OS09G0392200 PROTEIN 6 372 - -
Lan5g0292 376 SUPERFAMILY Galactose oxidase, central domain 105 300 IPR011043 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0292 Lan-Chr5 4145631 4149628 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0292 - - gmx:100809651 704.901