Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lan5g0250 | ATGACTGCTCAAACTCAGACCCAGGAAGAGCTTCTTGCCGCTCATCTCCAACAACAAAAGATCCATTCTGATGAGCCTCTGGTTGAGGATGAGGATGACGACGAGGATGATGACGATGATGATTCTGAGGATGAAAATGCAGATGGACAAGGTGATGCATCCGGTAGGTCCAAGCAGAGCAGAAGTGAGAAGAAGAGTCGCAAGGCAATGTTGAAACTTGGAATGAAACCTGTCACTGGTGTTAGCCGCGTGACGGTTAAAAAGAGCAAGAGTATCTTGTTTGTCATCTCAAAACCAGATGTTTTTAAGAGCCCAGCATCTGACACATACATAATATTTGGGGAAGCTAAGATCGAAGACTTGAGCTCACAGCTACAGACTCAGGCCGCAGAACAGTTCAAGGCTCCTAATGTAAGCAATGCGGCATTGAAGCCTGAATCCTCAACTACAGCTCAAGACGATGAGGAGGATGTGGATGAGACTGGTGTAGATCCCAAGGACATAGACTTGGTGTTGACTCAAGCTGGAGTTTCAAGATCAAGAGCTGTTAAAGCTCTTAAAGCTGCAGATGGTGACATTGTTGCTGCCATTATGGAGCTAACTAATTGA | 609 | 0.4565 | MTAQTQTQEELLAAHLQQQKIHSDEPLVEDEDDDEDDDDDDSEDENADGQGDASGRSKQSRSEKKSRKAMLKLGMKPVTGVSRVTVKKSKSILFVISKPDVFKSPASDTYIIFGEAKIEDLSSQLQTQAAEQFKAPNVSNAALKPESSTTAQDDEEDVDETGVDPKDIDLVLTQAGVSRSRAVKALKAADGDIVAAIMELTN* | 203 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lan5g0250 | 202 | MobiDBLite | consensus disorder prediction | 136 | 164 | - | - | |
| Lan5g0250 | 202 | Gene3D | - | 69 | 122 | IPR038187 | - | |
| Lan5g0250 | 202 | PANTHER | NASCENT POLYPEPTIDE ASSOCIATED COMPLEX ALPHA SUBUNIT-RELATED | 5 | 202 | IPR016641 | GO:0005854 | |
| Lan5g0250 | 202 | MobiDBLite | consensus disorder prediction | 1 | 74 | - | - | |
| Lan5g0250 | 202 | Pfam | NAC domain | 63 | 118 | IPR002715 | - | |
| Lan5g0250 | 202 | SMART | NAC_2 | 63 | 119 | IPR002715 | - | |
| Lan5g0250 | 202 | Gene3D | - | 163 | 200 | - | - | |
| Lan5g0250 | 202 | MobiDBLite | consensus disorder prediction | 27 | 48 | - | - | |
| Lan5g0250 | 202 | CDD | UBA_NAC_euk | 165 | 201 | - | - | |
| Lan5g0250 | 202 | ProSiteProfiles | NAC A/B domain profile. | 60 | 125 | IPR002715 | - | |
| Lan5g0250 | 202 | Pfam | HYPK UBA domain | 162 | 201 | IPR044034 | - | |
| Lan5g0250 | 202 | PANTHER | NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN | 5 | 202 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lan5g0250 | Lan-Chr5 | 3212039 | 3214230 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lan5g0250 | K03626 | - | gmx:100791967 | 283.878 |