Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0231 ATGGAAAAGATGTGTTTTTTGACATGGGTTTTGGTGGGTTTGATTATTATGATGATGGGTTTGAGTGTGGAAGGTCTTGGAGTAAATTGGGGAACACAAGCAACACATCAATTGAAACCAGATATGGTTGTTCAGATGATGAAAGAAAATGGAATTCAGAAAGTGAAGTTATTTGATGCAGATTCAGCAACTATGAGTGCTCTTTCTGGTTCTGGTATTGAAGTAATGGTTGCTATTCCAAATATTCAGCTTTCTGATATGGTTGATTATGATCGTGCCATGCAATGGGTTAGAAAGAATGTTACTAGTTATAGCTTCAATGGTGGAGTTAATATCAAGTATGTAGCAGTTGGGAATGAACCATTTTTGAAATCCTACAATAATTCATTCTTGAATGTGACCTTACCTGCATTACAGAACATTCAAAATGCCCTTAATGAGGCTGGTCTATCATCAGTAAAGGCAACAGTGCCCTTAAATGCTGATGTATATGAATCTCCAGAGTCCAATCCTGTTCCATCAGCAGGAATTTTTAGGCCTGATCTAAGTGATCTCATGACCCAAATAGTCCAATTTTTGCACAAGAATAATGCACCATTCACAGTTAACATTTACCCTTTCCTAAGTCTTTATGGAAATGATAATTTCCCTTTTGACTATGCTTTCTTTGATGGGCCAGTAAATCCCATAAATGATAATGGGATTCTTTACACCAATGTTTTTGATGCAAATTTTGATACTTTAGTCTCTTCTCTCAAATCTGTGGGCTTTGGAGACATGCCCATTTTGGTTGGAGAAGTTGGGTGGCCCACAGATGGAGACAAGAATGCAAATTTGGGCAATGCTTTAAGATTTTACAATGGGCTTTTACCCAGGCTTGCTTCAAATAAAGGTACCCCTCTCAGGCCTGGTTATATTGAAGTTTATCTATTTGGGCTTATTGATGAAGATGCTAAGAGCATTGCTCCAGGAAATTTTGAACGCCATTGGGGTATTTTTAGATATGATGGAAAGCCCAAGTTTCAATTAGATCTTTCTGGTAATAAGGGTCAAAATAATGTTCTAATGGGTGCACAAAATGTGTATTATCTTGACCCAAAATGGTGCATGTTTAATCCAGAGGCACAAAATCTAAGCGCACTTGCAGATAATATAAATTATGCTTGCACCTATGCAGATTGCACTGCACTTGGGTATGGATCTTCTTGCAATAATTTGGATGCTAATGGAAATGCATCATATGCATTTAATATGTATTACCAAGTGCAAAATCAGAATGATTTGGCATGCAATTTTGAAGGGTTAGCAATGATTACTACACAGAATATTTCAACACCTACTTGCAATTTTATCATTCAGATAAACCCTTCATATTCCTCTTCTTTGAGGCCCTCACTAGTGGGTTTATTTTTTGTTACAATATCCATCATTGTATTTTTGTAG 1443 0.3666 MEKMCFLTWVLVGLIIMMMGLSVEGLGVNWGTQATHQLKPDMVVQMMKENGIQKVKLFDADSATMSALSGSGIEVMVAIPNIQLSDMVDYDRAMQWVRKNVTSYSFNGGVNIKYVAVGNEPFLKSYNNSFLNVTLPALQNIQNALNEAGLSSVKATVPLNADVYESPESNPVPSAGIFRPDLSDLMTQIVQFLHKNNAPFTVNIYPFLSLYGNDNFPFDYAFFDGPVNPINDNGILYTNVFDANFDTLVSSLKSVGFGDMPILVGEVGWPTDGDKNANLGNALRFYNGLLPRLASNKGTPLRPGYIEVYLFGLIDEDAKSIAPGNFERHWGIFRYDGKPKFQLDLSGNKGQNNVLMGAQNVYYLDPKWCMFNPEAQNLSALADNINYACTYADCTALGYGSSCNNLDANGNASYAFNMYYQVQNQNDLACNFEGLAMITTQNISTPTCNFIIQINPSYSSSLRPSLVGLFFVTISIIVFL* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0231 480 SUPERFAMILY (Trans)glycosidases 26 344 IPR017853 -
Lan5g0231 480 Gene3D Glycosidases 25 353 - -
Lan5g0231 480 ProSitePatterns Glycosyl hydrolases family 17 signature. 260 273 IPR000490 GO:0004553|GO:0005975
Lan5g0231 480 Gene3D - 364 460 - -
Lan5g0231 480 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 7 463 IPR044965 GO:0004553|GO:0005975
Lan5g0231 480 SMART X8_cls 367 450 IPR012946 -
Lan5g0231 480 PANTHER GLYCOSIDE HYDROLASE, FAMILY 17, X8 7 463 - -
Lan5g0231 480 Pfam X8 domain 367 437 IPR012946 -
Lan5g0231 480 Pfam Glycosyl hydrolases family 17 26 344 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0231 Lan-Chr5 2845827 2848811 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0231 4 454 Miscellaneous Gene Families AT1G64760 74.229 0.0 682
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0231 - - gmx:102666963 801.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0231 5 2845827 2848811 Lan5g0231 5 2845827 2848811 PCT