Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0224 ATGGCGTTTTCTTCATCCATGGTTTCCTTGCTTATTCTTCTCCTTTTATGTTTCTCTTCTGGGTATTCGTCCCCTTTGTGCCTTCCACAATCTTCTTCGTTTCTCTATAATCTTCAATCTCAGTGCCCATTTCTGATCCAATCTAATCCACCTCTTCAGGTGGATGGAAATTTCATAGAAGGAGTTTTGTCTGGGAGAAAGAGCATTGGATATATTTCTATACTCTTCTATGCTTCCTGGTGTCCATTTTCACGCAGAATGCTTCCTGAATTTGAAACTCTTAGTTCCATGTTTCCCCAAGTAGAACATTTGACTTTAGAACAATCATCAGCATTGCCAAGCTTATACTCAAAATATGGAATCCATAGCTTGCCGGCTATCTTGCTGGTCAACCGGACATCAAGGGCGAGATATGATGGTCCAAACAATCTTCTCTCCCTTGTTGAATTTTTTCAGAGAAACACAGGATTGGAAGTGAGTGGTAGCATTGCTGTTGCTCAACTAAGCAACATGGCTAGTGATGATAATTCAACTATGAAGTCATTGATGGGTTTGTCTCTTAAAGAAATATCAATCAGGGAACCCTACTTAGTATTCTCTGTATTGTTTCTCTGTTTGAGGATACTTCTTTTTGTATTTCCGAAGATTGTATCGCGTCTTCGAGCATTCTGGGTTTCCTATATCCCTCATCTGAATATGCAAATATTTGGGGAGACGAGTCAAGTAATCGGACGCGTGCTTCATGCAATTGACATCAGGAGGATATGGACCAAGCTAAGACTATGCAAGACCAGGAGCTTTCATGAAAGGGCAAGAAGTGCGCGGGTATGGGCTTCGTCTCTGGCTTCGGTTTCTCTCGGCGAATCATCATCAGCTAGGTCATCATCTCAAGGTTTGAACTAG 903 0.4164 MAFSSSMVSLLILLLLCFSSGYSSPLCLPQSSSFLYNLQSQCPFLIQSNPPLQVDGNFIEGVLSGRKSIGYISILFYASWCPFSRRMLPEFETLSSMFPQVEHLTLEQSSALPSLYSKYGIHSLPAILLVNRTSRARYDGPNNLLSLVEFFQRNTGLEVSGSIAVAQLSNMASDDNSTMKSLMGLSLKEISIREPYLVFSVLFLCLRILLFVFPKIVSRLRAFWVSYIPHLNMQIFGETSQVIGRVLHAIDIRRIWTKLRLCKTRSFHERARSARVWASSLASVSLGESSSARSSSQGLN* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0224 300 PANTHER 5'-ADENYLYLSULFATE REDUCTASE-LIKE 7 8 296 - -
Lan5g0224 300 Gene3D Glutaredoxin 50 162 - -
Lan5g0224 300 PANTHER 5'-ADENYLYLSULFATE REDUCTASE-LIKE 7 8 296 IPR044794 -
Lan5g0224 300 SUPERFAMILY Thioredoxin-like 40 154 IPR036249 -
Lan5g0224 300 Pfam Thioredoxin 71 151 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0224 Lan-Chr5 2786501 2794357 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0224 - - aprc:113867833 412.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0749 10 9698228 9708854 Lan5g0224 5 2786501 2794357 LSH
Lan5g0224 5 2786501 2794357 Lan8g1018 8 12107658 12112593 LSH
Lan10g0749 10 9698228 9708854 Lan5g0224 5 2786501 2794357 PCT
Lan5g0224 5 2786501 2794357 Lan5g0224 5 2786501 2794357 PCT
Lan5g0224 5 2786501 2794357 Lan8g1018 8 12107658 12112593 PCT
Lan5g0224 5 2786501 2794357 Lan10g0749 10 9698228 9708854 PCT
Lan8g1018 8 12107658 12112593 Lan5g0224 5 2786501 2794357 PCT