Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0217 ATGCAGACAAGAACGGTTCAAGTGAAGCAAGTTTCAGATCTAGCTGGTGAGAGAGAGATTCATGAGTTCTTCTCTTTTTCTGGTGAAATCGAGCATATTGAGATCCAAAGAGAATCTGGGAAGTTAAAGACAGCATTTGTGACATTTAAAGATCCAAAAGCGCTTGAGATTGCGTTGTTATTATCGGGAGCAACGATAGTCGACCAGATTGTGAGTATAACTCCAGTTGAGAACTATGTACTAAACTATGACATGCAGGAAGTTAGGATGGTGGAACATGCTATGAACATTCCTCCTTCTGAAAATGTTTCATCAAATACTGAGGTGGAAAACGCTGGCCAAACCAATGGAAGAATGTACATCAGTAGAGCACAAGATGTAGTTACAAGTGTGCTGGCGAAAGGTTCGGCAATAAGACAAGACGCCATGAACAAGGCTAAAGCATTTGATGAAAAGCACCAATTGACTGCAAATGCATCTGCAAAGGTCATTTCTTTCGACAAGAAAGTTGGTCTGACAGAGAAACTAACAGTCGGCATTTCTGTGGTGAATGAGAAAGTGAAATCTGTTGATCAGAGGCTCCATGTTTCAGATAAAACCATGGCAGCAGTAATTGCAGCCGAGAGGAAGTTGAATAGTACTGGATCAGCTGTCAAAACAAGCAGATACGTGACTGCAGGAACATCATGGTTGAATGGCGCTTTTGGTAAGGTTGCAAAAGCCGGACAAGTTGCTGGTACTAAAACTAGAGAGAAGTTTCATATGGCTGTATCAAACTTGACAGCAAAGGAACCACCAATGGTTGTATAA 810 0.4148 MQTRTVQVKQVSDLAGEREIHEFFSFSGEIEHIEIQRESGKLKTAFVTFKDPKALEIALLLSGATIVDQIVSITPVENYVLNYDMQEVRMVEHAMNIPPSENVSSNTEVENAGQTNGRMYISRAQDVVTSVLAKGSAIRQDAMNKAKAFDEKHQLTANASAKVISFDKKVGLTEKLTVGISVVNEKVKSVDQRLHVSDKTMAAVIAAERKLNSTGSAVKTSRYVTAGTSWLNGAFGKVAKAGQVAGTKTREKFHMAVSNLTAKEPPMVV* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0217 269 Gene3D - 1 75 IPR012677 -
Lan5g0217 269 PANTHER RNA BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN-RELATED 1 266 - -
Lan5g0217 269 SUPERFAMILY RNA-binding domain, RBD 1 103 IPR035979 GO:0003676
Lan5g0217 269 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 8 66 IPR000504 GO:0003723
Lan5g0217 269 SMART rrm1_1 5 74 IPR000504 GO:0003723
Lan5g0217 269 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 4 78 IPR000504 GO:0003723
Lan5g0217 269 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 1 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0217 Lan-Chr5 2713922 2719184 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0217 - - zju:107433520 419.468