Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1102 ATGACAGGGATGCATCCAAAAGCATACCAGACTCGTAGTTCTAATGTCAAAGAGAAGTACATGGTCTGGACAAGTGAAATGGACTATTGTCTCGTTGATGTACTTGCTGAGCAAGTGAAAATGGGGAACAAAGTAGATGACATCTTGAAGCCTGCGGCATTTGCAGCTGCATTGAAAGTGTTAAATGCAAAGTTTGGTTTGTATTTGACAAAACAACACATAAAAAACCGGCTAAAGACATATAGGAAGCAGTTTAGAGTTTTGAAGGAAATCCTTGCTCATCGAGGATTTGTCTGGAATGAGACCCAACAGATGGTTACTGCAGATAATTCTGTGTGGAATGATTACATCAAGGCACACCCTGATGCCAGGATTTTCCGAGCAAAGCCCATTGAAAATTTTGACAAGTTATGTATAATTCTTGGAAATGATCAAGAAATTGCAAGCTTTTCTGAAAATTTTACAGAAATTGGTCTAAACTTGACAGTTGATAAGGGGGATCTAGATGTTTCCTTTGTGTCTGAAATACAGACTTATGGAAACCAGGCCAAAAGTCTGAGGTGGACACAAGAAATGGACCATTGGCTTGGAAGGATTCTTGCGGACCAAGTGAGGAGAGGGCTTAAAGTAGATAAGGTTTTGCAGACAGAAGCATATGATACAGCTGTTTCAGCTTTAAATGCAAAATTTGGGCTTCATCTTACAAAATACAACATTAAAAACCGTCTTAAAACTTGGAAGAAACAATATGAACAACTAAAGGAAATTCTTTCTCATGCTGGATTTAAGTGGGATGAAACAAGGAAAATGGTCACTGCAAATGATTCTACATGGAATGACTATATCCAGAAACATCTAGATGCAAGGAGTTTCCGTTCTAGAGTTTTTGAGAACTACGATCAGTTGTGCACAATCTTTGGCCATTTTAGCGAGCCTTTGCATCGTAATGAGTCTTTCCCTTCTGATGAGCATGTGGAGGCTGTAAGTGCCTGCCCGTTTAACTATGATACCATTGTTAAAGATCGAGGGAAGCATATGAGATGGACAAGCGAAATGGACAGCTGTCTAAGTGCAGTTCTCGTGCAGCAAATTAGGCTAGGCAACCGAAGCAAATTTGACTACAAATTAAAATCTGCTGCATTTGAAGCTGCTGTGTTGGCTATTAATGAAAAGTTTCAGCTTCATTTGATGAAAGAACATATTAAAAATCGTCTCAAGACATGGAAGAAACAGTATGATATTCTGAAGGAACTTCTGAAACATAGCAGCTTTGAATGGGATCAGAATCGAAAGATGGTCATGGCAGATGACTCTGTATGGAATGAATATATCAAGCAGATAAATCCAGATGCTCGGGTTCTTAAAGGACGAGTTATCAGAAACTTCAATGAATTATGCGTCATCATTGGTCACATTGATCCACCAGATATTTCATTGAATGGCAACATGAGTTTGACTATAGATGATGTTTTGGAAGCTGAAGAGACAAACCGCCACGGAACTCGCAATGCAATGATGAAAGTAAAGTATGTGACATGGACAGATGAGATGGATCATTGCTTAACGGAGCTTCTGGTCAATCAAGTAATGATGGGAAACAAGCTTGAGAAAAATTTCAAGACCTCGGCTTATGTAGTTGCTCTAACAGCTCTAAATGAGAGATTTGGCTTGAATTTAACAATAGAAAACATTAAGAACCGGTTGAAGACATGGAAGAAACAGTATGATCTTGTGAAGGAAATGCTGTATCTGGGGGGATTCAAGTGGGACGAGGGACAGAAAATGGTGGTTGCAACTGACTCAGAATGGAATGAATACATTAAGAAACATCCAGATGCTATGCATTTGAGAGGCAGATGTATAGAGAACTTCAATGAATTAGGTTTGATTGTTGCCAATGAGCAAACAAGTGGAAATTGGTTGGAAAACTATGAGAGGCCTGATGTAAATCTTTCTCCTAACTATGAAGAGCTTGCAGAAACTCCAGCACTGATGTTAGATCATGAAGAGACAAGCCATGATAACGCCAGCGACGAAGTGCAGGGCTCATCTGAGCAGACAGGAGCAAGGCCTTCATCGTCACATTCCAAACAACCATCGAAAAGGAGACGGACTAGTGATGTTCTGCTACAAATGATGAGTGTTATGGCTGCGGATATTGGCCGGATAGCTGATTCATTGACTGAAAGTAACAAGACTGTGTGCTTGGAGGAAGTGGTTGAAAAGGTACAGAATATTGATGAATTTGATGATGATCTCATCATTGAAGCATGTGAATATTTATGCTTTGATGATAAGAGGGCATGTATTTTTTTGAAATTAGACGAGAGATTAAGGAAAAAATGGTTGTTGAAGAGATTGCGTGGTTAA 2370 0.3941 MTGMHPKAYQTRSSNVKEKYMVWTSEMDYCLVDVLAEQVKMGNKVDDILKPAAFAAALKVLNAKFGLYLTKQHIKNRLKTYRKQFRVLKEILAHRGFVWNETQQMVTADNSVWNDYIKAHPDARIFRAKPIENFDKLCIILGNDQEIASFSENFTEIGLNLTVDKGDLDVSFVSEIQTYGNQAKSLRWTQEMDHWLGRILADQVRRGLKVDKVLQTEAYDTAVSALNAKFGLHLTKYNIKNRLKTWKKQYEQLKEILSHAGFKWDETRKMVTANDSTWNDYIQKHLDARSFRSRVFENYDQLCTIFGHFSEPLHRNESFPSDEHVEAVSACPFNYDTIVKDRGKHMRWTSEMDSCLSAVLVQQIRLGNRSKFDYKLKSAAFEAAVLAINEKFQLHLMKEHIKNRLKTWKKQYDILKELLKHSSFEWDQNRKMVMADDSVWNEYIKQINPDARVLKGRVIRNFNELCVIIGHIDPPDISLNGNMSLTIDDVLEAEETNRHGTRNAMMKVKYVTWTDEMDHCLTELLVNQVMMGNKLEKNFKTSAYVVALTALNERFGLNLTIENIKNRLKTWKKQYDLVKEMLYLGGFKWDEGQKMVVATDSEWNEYIKKHPDAMHLRGRCIENFNELGLIVANEQTSGNWLENYERPDVNLSPNYEELAETPALMLDHEETSHDNASDEVQGSSEQTGARPSSSHSKQPSKRRRTSDVLLQMMSVMAADIGRIADSLTESNKTVCLEEVVEKVQNIDEFDDDLIIEACEYLCFDDKRACIFLKLDERLRKKWLLKRLRG* 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1102 789 Coils Coil 236 256 - -
Lan4g1102 789 PANTHER EXPRESSED PROTEIN 12 170 - -
Lan4g1102 789 PANTHER EXPRESSED PROTEIN 501 788 - -
Lan4g1102 789 PANTHER EXPRESSED PROTEIN 339 490 - -
Lan4g1102 789 PANTHER EXPRESSED PROTEIN 180 331 - -
Lan4g1102 789 MobiDBLite consensus disorder prediction 670 705 - -
Lan4g1102 789 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 180 331 - -
Lan4g1102 789 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 501 788 - -
Lan4g1102 789 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 12 170 - -
Lan4g1102 789 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 339 490 - -
Lan4g1102 789 Pfam Myb/SANT-like DNA-binding domain 512 606 IPR024752 -
Lan4g1102 789 Pfam Myb/SANT-like DNA-binding domain 23 116 IPR024752 -
Lan4g1102 789 Pfam Myb/SANT-like DNA-binding domain 187 281 IPR024752 -
Lan4g1102 789 Pfam Myb/SANT-like DNA-binding domain 347 443 IPR024752 -
Lan4g1102 789 Coils Coil 561 581 - -
Lan4g1102 789 Coils Coil 398 418 - -
Lan4g1102 789 MobiDBLite consensus disorder prediction 677 695 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1102 Lan-Chr4 16699937 16712678 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1102 - - gmx:100785875 1137.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g1102 4 16699937 16712678 Lan2g0219 2 1814804 1818643 LSH