Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1058 ATGGCAAGAAAACCAGTTGAAGAAGCTCTTCCAAGAGAAACCCTCAAGTACCAGACATGGGTTTTGAGAGTCCTCATCCACTGTGATGGCTGCAAAAAGAAAGTCAAGAAAGTTCTTCAAGGAATCGATGGGGTTTATACAACATATGTTGATTCTGGGCAGCATAAGGTTACAGTCACTGGTAATGTGGACGCTGAGATTCTCATCAAAAAGCTTGAAAGAACTGGGAAATTTGCAGAGCTTTGGCCAGAGATTAAGCCTCCTGAGAAGAAAGATAATAAAAAGTCTGCAAAATCCAAGGGTGGTGGGAAGATGAATACTGAACCTATTGGAGATGGTGGTTCCAATGATGTTCCTCATGAAGAGTTAAACAAACAAGGCCATAGTGATGAATGCAAGGATCGCGGCGACGGAAGTGGTGGTGGTGGTGATAGCGATAAAAAGAATAAAAATAAAAATAAGAACAAAAACAATAGTAGCCGAAATGACGATTCTGCTCCTCCAAATAATGGAGGAGGAGAAATTAGTAGTAAAGTTGATGCAGGACAAGTTCCTTCAAGTTTGGCTACTTCAGTGGCATCAATGGAAATTATTGGTCCACATATTCAACATGGTTACTCATATCCACAAATGTATTATTCACCACATGCTCCTACTTCAGCATATGGTTTAAGCTATAACACTGCATATCCTGTTTCTAATGCTTCATATTATGTTGCTGCTCCTATCATGCCCATGCATGCTTATAATACTCCATACCCTTGTCTGCCTCCTCCGCCTTCGGATCCAATCAAGCATTACGGTTATGATGACGATGATGATGATGACGAATATGAAGGTGGATGCTCGATTATGTGA 858 0.4079 MARKPVEEALPRETLKYQTWVLRVLIHCDGCKKKVKKVLQGIDGVYTTYVDSGQHKVTVTGNVDAEILIKKLERTGKFAELWPEIKPPEKKDNKKSAKSKGGGKMNTEPIGDGGSNDVPHEELNKQGHSDECKDRGDGSGGGGDSDKKNKNKNKNKNNSSRNDDSAPPNNGGGEISSKVDAGQVPSSLATSVASMEIIGPHIQHGYSYPQMYYSPHAPTSAYGLSYNTAYPVSNASYYVAAPIMPMHAYNTPYPCLPPPPSDPIKHYGYDDDDDDDEYEGGCSIM* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1058 285 MobiDBLite consensus disorder prediction 269 285 - -
Lan4g1058 285 ProSiteProfiles Heavy-metal-associated domain profile. 26 81 IPR006121 GO:0046872
Lan4g1058 285 MobiDBLite consensus disorder prediction 83 101 - -
Lan4g1058 285 PANTHER HEAVY-METAL-ASSOCIATED DOMAIN PROTEIN 1 285 - -
Lan4g1058 285 CDD HMA 21 77 IPR006121 GO:0046872
Lan4g1058 285 MobiDBLite consensus disorder prediction 260 285 - -
Lan4g1058 285 Pfam Heavy-metal-associated domain 23 77 IPR006121 GO:0046872
Lan4g1058 285 MobiDBLite consensus disorder prediction 83 182 - -
Lan4g1058 285 MobiDBLite consensus disorder prediction 118 159 - -
Lan4g1058 285 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 1 285 - -
Lan4g1058 285 Gene3D - 16 86 - -
Lan4g1058 285 SUPERFAMILY HMA, heavy metal-associated domain 17 83 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1058 Lan-Chr4 15416901 15418442 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1058 - - gmx:100791626 275.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g1058 4 15416901 15418442 Lan2g0209 2 1741844 1743772 LSH