Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1049 ATGCCGAAAATGGCGTATTCGTTTCCAGAGGAAGTTCTAGAGCACGTGTTCTCCTTCATACACTGCAACAAGGATCGAAGCTCAATCTCCACGGTGTGCAAATCATGGTACGAAATCGAACGGTGGTGCAGGAAGAAGGTTTTTGTCGGTAACTGCTACTCCGTGAGTCCTACGGTGGTGATTAAACGGTTCCCGGAGGTTAGATCCATAGAGTTGAAAGGGAAACCGCACTTTGCGGATTTCAATTTGGTACCTGAGGGTTGGGGCGGGTATGTTTGTCCTTGGATCGAAGCCATGGCGTGTGGTTACCCTTGGCTTGAAGAGATCAAGCTCAAGAGGATGGTTGTAACGGATGAGAGCTTGGAACTTATCGCGAAATCGTTTAAGAATTTCAAGGCTTTGGTTCTCACCTCGTGTGAAGGTTTTACTAATGTTGGACTTGCTGCCATTGCTGCTAATTGCAGGGGTTTGAGGATTTTGGACTTGCAGGAGAGTGGAGACGAGGACCTTAATGGGAATTGGCTAAGCCATTTTCCTGATTCATACACATCTTTAGTTTCACTTAACATCTCTTGCATAGGCAATGAGGTGAGTTTGTCTGCCCTAGAGCGCCTGCTTTGTAGGTGTCCCAATCTGCAGACTCTCCGCCTGAATCGCTCGGTGCCCCTTGATAGGATTTCCAACCTACTTCGTCGTTGCCCTCAGCTGGTAGAATTAGGTACAGGAATCTACTCGACTGAGATGCGTCCAGAGGTCTTTGTAAACCTGGCAGAAGCACTTTCTGGGTGCAAGAAATTGAAGTGCTTGTCTGGCTTTTGGGATGTGCTCCCAACGTATCTTGCAGCTATTTATCCTATCTGCTCCAGGCTAACATCATTGAATTTGAGTTATGCTGTTCTGCAAAGCTCTGATCTTATCAAGCTTGTCAGTCAATGTCCGAGTCTGACACGTTTATGGGTGCTAGATTACATAGAAGATGCTGGTCTTGATGCTCTTGCTGCCTCGTGCAAGGATCTAAATGAGTTGAGGGTGTTTCCATCTGACCCATTTGGGTTAGAACCAAATGTTGCATTGACAGAACGGGGCCTTGTGTCTGTGTCTGAAGGCTGCCCAAAGCTCCAGTCAGTTCTATATTTTTGTCGCCAAATGTCTAATGCAGCCCTACATACAATTGCACAGAACAGGCCTAATATGACCCGTTTTCGCCTATGCATTATTGAGCCTCGAACTCCAGATTATCTTACCCTTCAACCTCTGGATTCTGGTTTTGGAGCTATTGTGGAGCATTGCAAGGATCTTCAGCGCCTATCACTTTCTGGTCTACTTACTGATCGTGTTTTCGAGTACATTGGGACTTATGCGAAGAAGCTGGAGATGCTATCTGTGGCTTTTGCTGGAGATAGTGATTTGGGACTCCATCATGTGCTGTCTGGTTGTGATAATCTTAGGAAGCTGGAGATTAGGGACTGCCCCTTTGGTGACAAGGCCCTTTTGGCTAATGCTGCAAAGCTGGAGACAATGCGATCCCTTTGGATGTCCTCTTGCTCTGTGAGTTACGGAGCATGCAAGCTGCTCGGTCAGAGAATGCCAAGACTTAATGTTGAAGTTATTGATGAAAGAGGACCTCCAGAATCAAGGCCATCGACTTGCCCTGTCGAGAAGCTTTATATATACAGGACTGTTGCCGGGCCAAGATCTGACATTCCTGGTTTTGTGTGGACAATGAAAGATGATTCTTAA 1740 0.4655 MPKMAYSFPEEVLEHVFSFIHCNKDRSSISTVCKSWYEIERWCRKKVFVGNCYSVSPTVVIKRFPEVRSIELKGKPHFADFNLVPEGWGGYVCPWIEAMACGYPWLEEIKLKRMVVTDESLELIAKSFKNFKALVLTSCEGFTNVGLAAIAANCRGLRILDLQESGDEDLNGNWLSHFPDSYTSLVSLNISCIGNEVSLSALERLLCRCPNLQTLRLNRSVPLDRISNLLRRCPQLVELGTGIYSTEMRPEVFVNLAEALSGCKKLKCLSGFWDVLPTYLAAIYPICSRLTSLNLSYAVLQSSDLIKLVSQCPSLTRLWVLDYIEDAGLDALAASCKDLNELRVFPSDPFGLEPNVALTERGLVSVSEGCPKLQSVLYFCRQMSNAALHTIAQNRPNMTRFRLCIIEPRTPDYLTLQPLDSGFGAIVEHCKDLQRLSLSGLLTDRVFEYIGTYAKKLEMLSVAFAGDSDLGLHHVLSGCDNLRKLEIRDCPFGDKALLANAAKLETMRSLWMSSCSVSYGACKLLGQRMPRLNVEVIDERGPPESRPSTCPVEKLYIYRTVAGPRSDIPGFVWTMKDDS* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1049 579 Gene3D - 2 44 - -
Lan4g1049 579 SUPERFAMILY RNI-like 83 344 - -
Lan4g1049 579 SMART LRR_CC_2 287 311 IPR006553 -
Lan4g1049 579 SMART LRR_CC_2 128 153 IPR006553 -
Lan4g1049 579 SMART LRR_CC_2 312 335 IPR006553 -
Lan4g1049 579 SMART LRR_CC_2 370 394 IPR006553 -
Lan4g1049 579 SMART LRR_CC_2 479 503 IPR006553 -
Lan4g1049 579 SMART LRR_CC_2 103 127 IPR006553 -
Lan4g1049 579 SMART LRR_CC_2 430 453 IPR006553 -
Lan4g1049 579 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 5 576 - -
Lan4g1049 579 SUPERFAMILY RNI-like 359 517 - -
Lan4g1049 579 Pfam Transport inhibitor response 1 protein domain 65 111 IPR041101 -
Lan4g1049 579 Gene3D Ribonuclease Inhibitor 45 575 IPR032675 -
Lan4g1049 579 Pfam F-box 6 46 IPR041567 -
Lan4g1049 579 PANTHER PROTEIN TRANSPORT INHIBITOR RESPONSE 1 5 576 - -
Lan4g1049 579 SUPERFAMILY F-box domain 7 40 IPR036047 GO:0005515
Lan4g1049 579 SMART fbox_2 8 49 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1049 Lan-Chr4 15239828 15243194 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1049 K14485 - gmx:100816241 1033.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g1049 4 15239828 15243194 Lan2g0202 2 1688228 1691242 LSH