Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0991 ATGTGTCTTCAATTTTCTGATCTTTCTCATAAATCCCTAAATTTCCTCTTCCTTGTCACTTCAAGTTCTTCAACACCGAAAATTACGATGCACTCCTCCAAACCCCCGCGCCGGAAAGTAGTTCCGACGAACGGAGAAGATTCCGGCGACAAACTTGAACAACTCCTTCTCTCCTCCGTCATCTGCAACAACGAAGACTTAGGTCCGTTCATCAGAAAAGCCTTCGTCTCCGGAAAACCGGAAACCCTCCACCACCACCTCCGCCATTTTGCTCGGACCAAAGAATCCGAGATCGAAGAAGTTTGCAAAGAACACTACCAGGACTTCATTGTCGCCGTCGACGATCTCCGATCTCTTCTCTCCGACGTCGATTCCCTCAAATCCTCACTCTCCGATTCCAACTCCAAGCTCCAATCCGTCGCTATTCCTCTCCTCTCTTCCCTCGATGCCTTTGTTGAAACTCGAAACGTTTCAAAGAACGTCAACCTCGCAATCGAATCGGTCAACACGTGTATTCGGTTAACGGAAGTGTGCTCACGCGCTAACCGCCATCTCTCGAGTGATAACTTCTACATGGCGTTGAAGTGCGTTGACGCAATTGAGAGAGAGTATTTGCACAAAACGCCGTCGTCGACGCTTAAACGGATGCTGGAGAAGAAGATTCCGGAGATTAGGTCACACATAGAGAGGAAAGTGAATAAGGAATTCGGTGATTGGTTGGTTGAGATTAGAGTTGTGAGTCGGAATTTGGGGCAGTTAGCGATTGGACAAGCTTCCGCGGCGAGGCAGAGAGAAGAAGATCTGAGAATCAAGCAGCGGCAAGCGGAGGAGCAGAGTAGGCTTAGCTTGAGGGATTGTATTTATGCACTTGAGGAAGAGGATGATGATGGAATCGTGGCCGGTGGTGGTGGAATTGGAGAAGATGGATATGGTGGTAATAATGGTGGTGGCGGTGGTGGTAGTGGTGGTGGTGGAATTCTTGGATTTGATTTGACTCCGTTGTACAGAGCTTACCATATTCATCAGACTTTAGGGTTAGAAGATCGGTTTAAGAAGTACTATTTTGAGAACCGGAAGCTTCAGTTGACTTCAGATTTTCAGGTATCGTCAATGACCCCTTTTCTTGAGTCCCATCAAACCTTTTTTGCTCAAATTGCGGGTTTCTTTGTAGTGGAGGATAGGGTTTTGAGGACTGGTGGTGGTTTGATATCGAAAATGGAAGTTGAGAATTTGTGGGAGATTGCTGTTAGTAAAATGTGTTCTGTTTTAGAGGATCAGTTTTCCAGAATGCAAACTGCAAATCATCTATTGCTGATCAAGGACTATGTTAGTCTCTTAGGTGTAACCTTACGTAGATTTGGGTACCCAATTGATGCATTGCTTGATGTTTTGAGCAAACATAGGGATAAATACCATGAGCTGTTGTTATCAGATTGTCGGAAGCAGATTGCTGAGGCCCTCGCTGCTGATAAGTTTGAGCAGATGTTGATGAAGAAGGAGTATGAGTATTCCATGAATGTGCTTTCTTTCCAAATACAAACTTCAGATATTGTCCCTGCTTTTCCTTATCTAGCACCGTTTTCGTCAACGGTACCAGATTGTTGTCGCATTGTGAGGTCCTTCATTGAGGATTCTGTAAGTTTCATGTCATATGGCGGGCAGCTTGAGTTCTATGATGTTGTTAAGAAATATTTGGACAGGCTTTTGAGTGAGACTTTAGATGAAGCTTTGTTAAAGCTTATTAACACATCAGTTAATGGTGTCTCCCATGCAATGCAAGTAGCAGCAAATATGACTGTGTTGGAGCGTGCGTGTGATTTTTTCTTTCGCCATGCTGCACAGCTTTCAGGGGTTCCCTTGAGATTGGTGGAAAGAAGCAGGAGACAGTTCCCTTTGAGAAAAGCTCGTGATGTTGCCGAAGAGATGCTCTCTGGGTTACTCAAAGCCAAAGTTGATGGATTTATGACCTTGATTGAGAATGTAAATTGGATGGCTGATGAGCCATCTCAGAGTGGAAATGAATATGTGAACGAGGTCATAATTTATTTGGAAATTTTAGTTTCAACTGCTCAACAGATATTGCCAGGTCAAGTCCTTAAAAGAGTTCTGCAGAGAGTTCTTTCCCACATATCAGATAAAATAGTTGGGACCTTAGTTAGTGATTCTGTTAAGAGGTTTAATGTAAATGCTATTACTGGAATTGATGTGGATATCAGGCTCTTAGAATCATTTGCAGAAAATCAGGGGGCCCTTTTCCCGGATGGGGATATCGATCAGTTGAGAGCAGCACTTGTTGAGTCAAGGCAGTTGATTAATTTGCTACTGAGCAATCATCCCGAAAACTTCCTGAATCCAGTGATCAGGGAGAGGAGTTACAATACTTTGGACTACAGGAAAGTGGTGGCTGTTTCGGAGAAGTTGAAGGATCCTTCGGATCGCCTCTTTGGAACCTTCGGCAGTCGTGGAGTCAGGCAGAATCCAAAAAAGAAATCACTGGATGCATTGATAAAAAGGCTTAAGGATGTTAGCTGA 2532 0.4412 MCLQFSDLSHKSLNFLFLVTSSSSTPKITMHSSKPPRRKVVPTNGEDSGDKLEQLLLSSVICNNEDLGPFIRKAFVSGKPETLHHHLRHFARTKESEIEEVCKEHYQDFIVAVDDLRSLLSDVDSLKSSLSDSNSKLQSVAIPLLSSLDAFVETRNVSKNVNLAIESVNTCIRLTEVCSRANRHLSSDNFYMALKCVDAIEREYLHKTPSSTLKRMLEKKIPEIRSHIERKVNKEFGDWLVEIRVVSRNLGQLAIGQASAARQREEDLRIKQRQAEEQSRLSLRDCIYALEEEDDDGIVAGGGGIGEDGYGGNNGGGGGGSGGGGILGFDLTPLYRAYHIHQTLGLEDRFKKYYFENRKLQLTSDFQVSSMTPFLESHQTFFAQIAGFFVVEDRVLRTGGGLISKMEVENLWEIAVSKMCSVLEDQFSRMQTANHLLLIKDYVSLLGVTLRRFGYPIDALLDVLSKHRDKYHELLLSDCRKQIAEALAADKFEQMLMKKEYEYSMNVLSFQIQTSDIVPAFPYLAPFSSTVPDCCRIVRSFIEDSVSFMSYGGQLEFYDVVKKYLDRLLSETLDEALLKLINTSVNGVSHAMQVAANMTVLERACDFFFRHAAQLSGVPLRLVERSRRQFPLRKARDVAEEMLSGLLKAKVDGFMTLIENVNWMADEPSQSGNEYVNEVIIYLEILVSTAQQILPGQVLKRVLQRVLSHISDKIVGTLVSDSVKRFNVNAITGIDVDIRLLESFAENQGALFPDGDIDQLRAALVESRQLINLLLSNHPENFLNPVIRERSYNTLDYRKVVAVSEKLKDPSDRLFGTFGSRGVRQNPKKKSLDALIKRLKDVS* 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0991 843 Coils Coil 258 278 - -
Lan4g0991 843 PIRSF Sec15 27 843 IPR007225 GO:0006886|GO:0090522
Lan4g0991 843 Pfam Exocyst complex subunit Sec15-like 503 807 IPR046361 -
Lan4g0991 843 PANTHER EXOCYST COMPLEX COMPONENT SEC15B 36 843 - -
Lan4g0991 843 MobiDBLite consensus disorder prediction 26 47 - -
Lan4g0991 843 Gene3D - 457 628 IPR042045 -
Lan4g0991 843 PANTHER SEC15 36 843 IPR007225 GO:0006886|GO:0090522
Lan4g0991 843 Gene3D Dsl1p vesicle tethering complex, Tip20p subunit, domain D 635 782 IPR042044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0991 Lan-Chr4 13729361 13732634 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0991 K19985 - gmx:100796432 1348.95