Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0990 ATGGAACATGTTACAAAACTCTTCTCGGTCTTGGCTCTCTGTATGGTTGTAATGGCACACCAAACTGCTGCAGCAGAATTCAACAAAGGCAAGGACCTAATCAACAACCTATGCAACCTTTCACCAACCAAGGACCTTTGCATTCAAGTCCTTTCCTCTGATGAAACAAGTTCAACTGCTGACCTTAGAGATTTAGCTGTTATCGCATTGCGTGTCGCGGCCTCGAATGCTTCAAGCATCCTCACCGATGCGAAGATGCTTATTGATGATGTAAAACTGAACCCTAAAGTTCAACAAGGGCTAGCAGATTGCAAAGAAAATATATTAGACGCCGTGGATCAACTCGAAGACACAACTGCAGCATTGTTGGAGGATGATAATAGTCAAGCTCAGAAATGGTTGAAGGCTGCATTGGCTGCTATTACAACATGTGATGCTTCTATTCCTGGAGATGATGATGTTCTTTCAGTGAAGAGTGCTTCATTCAGGAAATTGTGCAATATTGCCATATTCCTCACTAAGTCCTTGCCATCCTCCCATTCATAA 546 0.4286 MEHVTKLFSVLALCMVVMAHQTAAAEFNKGKDLINNLCNLSPTKDLCIQVLSSDETSSTADLRDLAVIALRVAASNASSILTDAKMLIDDVKLNPKVQQGLADCKENILDAVDQLEDTTAALLEDDNSQAQKWLKAALAAITTCDASIPGDDDVLSVKSASFRKLCNIAIFLTKSLPSSHS* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0990 181 SMART PMEI_2 29 172 IPR006501 GO:0004857
Lan4g0990 181 PANTHER PECTINESTERASE 1 177 - -
Lan4g0990 181 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 176 IPR035513 -
Lan4g0990 181 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 1 177 - -
Lan4g0990 181 Pfam Plant invertase/pectin methylesterase inhibitor 32 170 IPR006501 GO:0004857
Lan4g0990 181 TIGRFAM PME_inhib: pectinesterase inhibitor domain 6 175 IPR006501 GO:0004857
Lan4g0990 181 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 176 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0990 Lan-Chr4 13719339 13720213 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0990 - - gmx:102667060 228.794