Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0944 ATGCAGAAGCAAAGGTTGGAGGGTAAGGTGGCTCTAATCACAGGGGCAGCAAGTGGGATTGGAGAAGAATCAGCGAGACTATTCGCCAAAAATGGAGCACTTGTTGTAGCAGTAGATGTTCAAGATGAACTTGGTGAAAAAGTTGCAGCCTCAATAGGCTCAAATAAAGTAACTTACCATCATTGTGATGTAAGAGATGAAAAACAAGTTGAGGAAACAATGAAGTTCACTTTAGAGAAACATGGTCACATAGATATCTTGTTTAGCAATGCTGGAATTCTAGGCTCCTTATCTAGCATCTTTGATCTTGATCTGAATGAATTTGACAACACCATGGCTACGAATATTCGCGGCGCGGCGGCTATGATTAAGCATGCAGCCAGAGCCATGGTTGAGAAAAAAGTCCAAGGGTCTATAATATGCACAACAAGTGTTTCAGCCTCTATTGGTGGAACTGGCCCTCATGGTTATACAACATCAAAACATGCACTTCTTGGGCTAGTAAGATCAGCATGTAGTGAACTTGGTGCATATGGGATTAGAGTTAATAGTATTTCACCTTATGGAGTTGCTACACCACTTGCATGTAGAGCTTTTAATCTTGAACCTCATGAAGTTGAAGCTAATAGTTGTGCTGAGGCTAATCTGAAAGGTGTTGTGTTGAAAGCTAAGCATATTGCAGAAGCTGCTTTGTTTCTTGCTTCTGATGAAGCTATTTACATTAGTGGTCATAACTTGGTTGTTGATGGTGGATTCACTGTGGTTAATAGGAGTACTAATTGTTTTGCACCTGTTTACACATAG 804 0.4055 MQKQRLEGKVALITGAASGIGEESARLFAKNGALVVAVDVQDELGEKVAASIGSNKVTYHHCDVRDEKQVEETMKFTLEKHGHIDILFSNAGILGSLSSIFDLDLNEFDNTMATNIRGAAAMIKHAARAMVEKKVQGSIICTTSVSASIGGTGPHGYTTSKHALLGLVRSACSELGAYGIRVNSISPYGVATPLACRAFNLEPHEVEANSCAEANLKGVVLKAKHIAEAALFLASDEAIYISGHNLVVDGGFTVVNRSTNCFAPVYT* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0944 267 PANTHER SHORT-CHAIN DEHYDROGENASE REDUCTASE 1 259 - -
Lan4g0944 267 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 IPR002347 -
Lan4g0944 267 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 IPR002347 -
Lan4g0944 267 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 IPR002347 -
Lan4g0944 267 Pfam Enoyl-(Acyl carrier protein) reductase 15 253 - -
Lan4g0944 267 Gene3D - 1 261 - -
Lan4g0944 267 PRINTS Glucose/ribitol dehydrogenase family signature 10 27 IPR002347 -
Lan4g0944 267 PRINTS Glucose/ribitol dehydrogenase family signature 82 93 IPR002347 -
Lan4g0944 267 PRINTS Glucose/ribitol dehydrogenase family signature 131 147 IPR002347 -
Lan4g0944 267 PRINTS Glucose/ribitol dehydrogenase family signature 157 176 IPR002347 -
Lan4g0944 267 PRINTS Glucose/ribitol dehydrogenase family signature 178 195 IPR002347 -
Lan4g0944 267 PRINTS Glucose/ribitol dehydrogenase family signature 216 236 IPR002347 -
Lan4g0944 267 PANTHER SHORT-CHAIN DEHYDROGENASE REDUCTASE 3B 1 259 - -
Lan4g0944 267 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 255 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0944 Lan-Chr4 11842924 11844235 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0944 6 254 Acyl Lipid Metabolism Gene Families AT3G55290 32.210 2.93e-26 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0944 - - gmx:100811279 434.106