Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0835 ATGTCCCTATATTCTGATTCACCGGCGGGTTCTTCCGGCAGAGATTGTCTCTTCCCGTCGCCGTCGTTTCCACGGTCGTCACAAACACCGCAATACAGCCGTCGATTCCACTCAAAGCCATACACACAACCGCAAACTATTCCACACCGCCGCCGCATAGTTCAATTCTCACGCGCTCCAACTTCAATTCCAACCGTTTCTGTTTCCGATGTGGAGAAGAAAGAGAAATTGTTTTCGAAGAAGTACTACAACTTTATCTGGTTTTCACAATTTCGTTATCACTTTGCTATTGTGATTTTGACCATTGCGTTTCTGATGCTGTTGATGTTCAGAAATATACATCTACAAAGCCAACTCAATAAGTTGCAGGGTGAGATTGTCAGCCTTAATCTCAGATTATATGTGTGCCATAAGTTGGACCCCCTAAACATTACCAGTGCTACAATTCAGGACCCTAATACTTTTGCGAGTGGAAACTTCAAAAGAAATCTAGCACTTCTTTCCTCCTTCACACTTCTATTTATCCCTCTTACTATTTTCAAGTACATAGACTATGTATCAAAATCAAGATTGTCTGACAATATATCAGAACAAATTTCTCTAAAGAAACAAATAGCATATTGGGTTGATGTCTTTTTATCAGTTCACCCATATGCTAAGCCACTTGTTTTGTTAGTTGCAACACTGTTGCTAATTTTTCTTGGAGGATTGGCCCTTTTTGGTGTAACTTCCGAGGACTTAGCACATTGCCTCTGGTTATCTTGGACCTATGTTGCTGATTCTGGCAACCATGCTAGCTCCGAAGGTATTGGTCCCAGGTTAGTTGCGGTTTCTATTAGCTTTGGCGGGATGCTTATATTTGCAATGATGCTTGGGCTTGTATCTGATGCAATTTCTGAGAAGTTTGATTCACTGAGGAAAGGAAAAAGTGAGGTGGTTGAGCAAAACCATACTTTGATTCTTGGCTGGAGCGATAAATTGGGTTCATTACTGAATCAGCTTGCCATAGCCAATGAGAACCTATGTGGGGGAACTGTTGTAGTGATGGCTGAGCGAGACAAGGAAGAAATGGAGCTCGACATTGCAAAAATGGAGTTTGACTTCAAAGGAACATCTGTCATATGCAGAAGTGGCAGTCCCGTAATTTTAGCTGATCTGAAAAAGGTTTCTGTTTCAAAGGCTCGTGCAATAATTGTCCTCGCTGAAGATGGGAATGCTGATCAGAGTGATGCCCGCGCTTTGAGAACAGTCTTGAGTCTAACTGGAGTCAAAGATGGATTACGAGGGCACATAGTGGTTGAATTGAGTGATTTAGACAATGAGGTCCTTGTTAAACTTGTTGGTGGTGATCTTGTTGAAACTGTCGTAGCTCATGATGTCATTGGTCGGTTGATGATTCAATGTGCTCGGCAGCCTGGACTTGCACAGATTTGGGAAGATATACTTGGATTTGAGAATTGTGAATTCTACATCAAAAGATGGCCACAGTTGGATGGTATGCAATTTGAGGATGTATTGATCAGCTTTCCTGATGCAATTCCATGTGGAGTCAAAGTTGCAGCACATGGTGGTAAAATTATTTTGAATCCAGATGACTCCTATGTTCTACAAGCCGGTGATGAAGTTCTGGTCATTGCAGAGGACGACGATACTTATGCCCCAGTGTCCTTTCCTAAGGTTTGGAGGGGAAGCTTACCCAAGGATTTTGTTTGTCCAAAGTCTCCAGAAAGAATACTTTTTTGTGGTTGGAGGCGTGATATGGAGGACATGATCATGGTTTTAGATGCATCTCTTGCAGAGGATTCTGAACTCTGGATGTTCAATGATGTTCCAGAAAAAGAGAGGGAAAAGAAGCTAACAGATGGTGGCCTTGACATAAATCGATTGGAAAATATATCACTGGTTAATCGTGAGGGGAATGCTGTCATACGACGTCACCTGGAAAGCCTTCCATTGGAATCATTTGATTCGATATTGATTTTGGCCGATGAATCAGTAGAGGATTCAGCAATTCAAGCTGACTCTAGATCTCTTGCCACATTGCTTTTAATTCGTGACATACAAGCTAAGCGTCTTCCTTATAGTCAAGCTGACGGAGGAAGCTTCTCAAAAGGTTCATGGATGGGGGAAATGAAGCAGGCTTCAGATAAAACAGTTATAATCAGTGAAATTTTGGATCCTAGGACAAAAAATCTTTTATCTATGTCAAAAATTAGTGATTATGTTTTATCAAATGAACTTGTCAGCATGGCTTTGGCCATGGTTGCAGAAGATCGACAGATAAATCACGTATTGGAAGAGCTATTTGCAGAGGAGGGAAATGAGATGCATATAAGGCAAGCAGATCTGTACCTGTGTGAAGGTGAGGAATTGAGTTTTTATGAAATAATGTTAAGAGCTCGGCAGAGAAGAGATATCGTGATCGGGTACCGTTTAGCGAATGCAGAAAGAGCAGTCATTAACCCACCAGCCAAAACTGACAGACGGAAGTGGTCAGTGAAGGATGTTTTTGTGGTCATTGCTGAAAAGGAATGA 2535 0.417 MSLYSDSPAGSSGRDCLFPSPSFPRSSQTPQYSRRFHSKPYTQPQTIPHRRRIVQFSRAPTSIPTVSVSDVEKKEKLFSKKYYNFIWFSQFRYHFAIVILTIAFLMLLMFRNIHLQSQLNKLQGEIVSLNLRLYVCHKLDPLNITSATIQDPNTFASGNFKRNLALLSSFTLLFIPLTIFKYIDYVSKSRLSDNISEQISLKKQIAYWVDVFLSVHPYAKPLVLLVATLLLIFLGGLALFGVTSEDLAHCLWLSWTYVADSGNHASSEGIGPRLVAVSISFGGMLIFAMMLGLVSDAISEKFDSLRKGKSEVVEQNHTLILGWSDKLGSLLNQLAIANENLCGGTVVVMAERDKEEMELDIAKMEFDFKGTSVICRSGSPVILADLKKVSVSKARAIIVLAEDGNADQSDARALRTVLSLTGVKDGLRGHIVVELSDLDNEVLVKLVGGDLVETVVAHDVIGRLMIQCARQPGLAQIWEDILGFENCEFYIKRWPQLDGMQFEDVLISFPDAIPCGVKVAAHGGKIILNPDDSYVLQAGDEVLVIAEDDDTYAPVSFPKVWRGSLPKDFVCPKSPERILFCGWRRDMEDMIMVLDASLAEDSELWMFNDVPEKEREKKLTDGGLDINRLENISLVNREGNAVIRRHLESLPLESFDSILILADESVEDSAIQADSRSLATLLLIRDIQAKRLPYSQADGGSFSKGSWMGEMKQASDKTVIISEILDPRTKNLLSMSKISDYVLSNELVSMALAMVAEDRQINHVLEELFAEEGNEMHIRQADLYLCEGEELSFYEIMLRARQRRDIVIGYRLANAERAVINPPAKTDRRKWSVKDVFVVIAEKE* 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0835 844 PANTHER ION CHANNEL CASTOR-RELATED 12 844 - -
Lan4g0835 844 Pfam Castor and Pollux, part of voltage-gated ion channel 458 555 IPR010420 -
Lan4g0835 844 Coils Coil 347 367 - -
Lan4g0835 844 Coils Coil 112 132 - -
Lan4g0835 844 PANTHER ION CHANNEL POLLUX-RELATED 12 844 IPR044849 GO:0006811
Lan4g0835 844 MobiDBLite consensus disorder prediction 1 43 - -
Lan4g0835 844 MobiDBLite consensus disorder prediction 21 43 - -
Lan4g0835 844 Gene3D - 307 452 - -
Lan4g0835 844 SUPERFAMILY TrkA C-terminal domain-like 488 552 IPR036721 GO:0006813
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0835 Lan-Chr4 10325573 10334530 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0835 K21866 - gmx:732613 1357.43