Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0826 ATGGTGTCTGTTGGTTCAAAGGCATTGCCATCGAGAGCAACAAGAACACACAACTTGACAAACGTTAACTCAATGGGCGAACACGAGTATGAATCCTACAATCAAGGCAGTAGTAGTAAGAAAGGAATGAGGAGGAAGCCAAAGAAAGGTAGTGCTGGTTTCCATTCAGATGATTCTAATAAAACTGTTGCAAGTGTGCAAGACAGTAGGACCTTCGAGCATGAAAACTATTCAGCTGATCAAGGATCACGCATTAGGAAACAGGTTGACCCTGAAACATCAAAGTACTTCTCAGAAATTGCAAATCTTTTTGAAAGTGATGAGGTTGAATTTGAGGAGCGATTACTTATATGCGGCAATGCTCTCGAAGAAACCAAGGGAAAAGAATTTGAAATTGCAACTGATTATATTCTAAGCCATACTTTGGAAACAATCCTCCAGGGCTGTGATGCAGACCACCTTTGTGGTTTCCTTCAAAGTTGTGCAAAGGACTTCCCTTCTATTGCAATGGACAGATCTGGTTCTCATGTGGCTGAGGCAGCCCTCAAATCTTTAGCTGCTCATCTTCAAGACGAGGAGGTTCGCCCTCTGGTTGAGGAGACTTTAACCGTGATATGCAAGGTGATTGGAGCTAATTCTGTTGACGTAATGTGTAATTGCCATGGTTCTCATGTGCTTCGGAGCCTTCTTTGCCTTTGTAAAGGAGTACAACCACAAAACTCTGGTTACTATTTCTCAAAATCAACGACAGTGCTAGCAGAGCGGTTGAATTTGAAGGAAATTCCTTCAAAGAAAGATGATGGAACAAATTTTCAGTCCGGATTTCCAGATTTGCTGAAATTGCTTGTGTCAGAGATGTTAAAGCATGCTAGAAAATGGATCAAGACCCTCCAAGTTGACCAATTCAGCAGTTTGGTTTTTCAGACAACTCTAAGGGTGCTGGCAGGCAACGACGAAGAGGTGCTACACGTGATTCCTATCCTTCTTGGCTGCAAGGATAAGAATATTGATGAGGGCAATTTTATAGAGACTAAAGTAGCTCCAGAGATTTTGAATTTGTTAAATGAAACTGAATTTAGTCATCTAATGGAGGTTGTTTTGGAAGTATCTCCCGAGGTTTTATTCAATGAATTGTTCACAAAAGTATTCAAGAACTCATTGTTGGACTTATCATCTTATCCATGTGGGAACTTTGTTGTTCAAGCATTGATTTCCCATACAAGCAGTCAACCTCTGTTGGAGTTGATCTGGGAAGAACTTGGACCAAATATGGAAGATCTTTTCAAAATGGGAAGGCCAGGAGTCGTTGCTGCACTTATTGCTGCCAGTGAGAGGCTCCATGTTAATGAACACAAGTGTTGTCAAGTCCTTGCCGGAACAGTTTGTTCAGTAGATGAGTCTCCAAAATGGATTGTTCCAAGACTACTATTTCTTGATAGCTATTTTGCTTCCGAAGATAGGTCCAATTGGAGCTGGCAAAGTGGTGCTAAAATGAATGTCATGGGTTCTCTGATTCTGCAGGCAATATTCCGCTTTAAAAGTGAATATATACAGCCTTTTATCACCAGTATAATATCCATGGAAGCAACTCATGTGCTTGAAGCAGTGAGAGATACAAAGGGATCACATGTTATTGAGGCTTTTCTAACTTCAGGAGCTTCCGGTAAACATAAGTTCAGATTGGTTAAAAAACTACAGACACATTTTGGAGAGGTTGCACTCAGCTCATCGGGTGCTTTTACCATTGAAAAGTGCTTCACTGCCTGTAATCTGTCACTGAGAGAGACTATAGTGTCCGAGTTGGCGGCTGTGGGAAATGAACTTTCCAGGACAAAGCAAGGGTATTACCTATTGAGGAGACTAGATGTTGAGGGATATGCGGCCAGTCCAGATCATTGGAGGTCAAAACAAGCATCCAAAGAATCCACTTACAAAGATTTTTATGCTACTTTTGGTTCCAGTAATACAAAGTCAACCAAAAATGATGGCTTTCTTGCTGACAATTCAAATACTAAATCAAATCCAAAAAATGTGAAGGAAATGAGAAAAGAGATTGACCAATCCCTAACTTCTGCTGCACCGTTTCTGAGCATGCATGGTATGAACAAAAACCCGAAAGATGCAAAGAAGAAACATAAGAGAAATGCTCAAGATGGTGCAGAGGATGATAACTCTAGCAAGAAAAAGAAAAAGTCTAAGAAGGAGAAGAATGAAAGTGGGCATGATGATAAAAAGACTTCGAAGAAACGGCATAGAGATGGTAACATATCTGAAGCTTCTCCGAAGAAATTGAAAGCATAG 2301 0.4063 MVSVGSKALPSRATRTHNLTNVNSMGEHEYESYNQGSSSKKGMRRKPKKGSAGFHSDDSNKTVASVQDSRTFEHENYSADQGSRIRKQVDPETSKYFSEIANLFESDEVEFEERLLICGNALEETKGKEFEIATDYILSHTLETILQGCDADHLCGFLQSCAKDFPSIAMDRSGSHVAEAALKSLAAHLQDEEVRPLVEETLTVICKVIGANSVDVMCNCHGSHVLRSLLCLCKGVQPQNSGYYFSKSTTVLAERLNLKEIPSKKDDGTNFQSGFPDLLKLLVSEMLKHARKWIKTLQVDQFSSLVFQTTLRVLAGNDEEVLHVIPILLGCKDKNIDEGNFIETKVAPEILNLLNETEFSHLMEVVLEVSPEVLFNELFTKVFKNSLLDLSSYPCGNFVVQALISHTSSQPLLELIWEELGPNMEDLFKMGRPGVVAALIAASERLHVNEHKCCQVLAGTVCSVDESPKWIVPRLLFLDSYFASEDRSNWSWQSGAKMNVMGSLILQAIFRFKSEYIQPFITSIISMEATHVLEAVRDTKGSHVIEAFLTSGASGKHKFRLVKKLQTHFGEVALSSSGAFTIEKCFTACNLSLRETIVSELAAVGNELSRTKQGYYLLRRLDVEGYAASPDHWRSKQASKESTYKDFYATFGSSNTKSTKNDGFLADNSNTKSNPKNVKEMRKEIDQSLTSAAPFLSMHGMNKNPKDAKKKHKRNAQDGAEDDNSSKKKKKSKKEKNESGHDDKKTSKKRHRDGNISEASPKKLKA* 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0826 766 MobiDBLite consensus disorder prediction 1 83 - -
Lan4g0826 766 MobiDBLite consensus disorder prediction 56 72 - -
Lan4g0826 766 Gene3D - 77 429 IPR011989 -
Lan4g0826 766 SUPERFAMILY ARM repeat 108 317 IPR016024 -
Lan4g0826 766 Gene3D - 496 643 IPR011989 -
Lan4g0826 766 MobiDBLite consensus disorder prediction 9 40 - -
Lan4g0826 766 SMART pum_5 124 159 IPR001313 GO:0003723
Lan4g0826 766 SMART pum_5 527 563 IPR001313 GO:0003723
Lan4g0826 766 SMART pum_5 345 380 IPR001313 GO:0003723
Lan4g0826 766 SMART pum_5 564 599 IPR001313 GO:0003723
Lan4g0826 766 SMART pum_5 160 195 IPR001313 GO:0003723
Lan4g0826 766 SMART pum_5 382 417 IPR001313 GO:0003723
Lan4g0826 766 Pfam Pumilio-family RNA binding repeat 582 601 IPR001313 GO:0003723
Lan4g0826 766 Pfam Pumilio-family RNA binding repeat 388 418 IPR001313 GO:0003723
Lan4g0826 766 MobiDBLite consensus disorder prediction 692 766 - -
Lan4g0826 766 MobiDBLite consensus disorder prediction 711 766 - -
Lan4g0826 766 PANTHER NUCLEOLAR PROTEIN 9 36 732 IPR040000 GO:0003723
Lan4g0826 766 SUPERFAMILY ARM repeat 277 622 IPR016024 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0826 K14790 - gmx:100797960 1030.78