Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0642 ATGGGTGTTTTCAGTCACGAATTCGCCACCCATTCTTTAGTGTCTCCTTCTAGGCTTTACAAAGCTATGGCATCAGATTTTCATAACCTACTTCCAAAGATTGTAGATGCCATTCACAGTGTTGAAACCATTGAAGGAAATGGTGGTGCAGGAACCATATTCAAGGTTACCTTGGTTGAAGGTGATCGAAGCCGATATTCATTTCACAAAATTGAAGCAATTGATGAGGCAAACTTGATATACAACTATAGCGTATTTGGGGGTACAGGATTGTCAGAAACATGGGAGAAGATCACATTTAAAACTATAGTGTTGGAAGGACCAAATGGAGGATCCATTAGGAATACAAGAGTCAAATATTTAACCAAAGGTGATGGTGAGATCAATGAAGAGGTTTTCAAGAATGATAAAATAAGGGCTGATGGACTTGTAAAGTTCCTTGAAGGTTACCTTTTGGAAAATCCTGATTACAAGTGA 477 0.3836 MGVFSHEFATHSLVSPSRLYKAMASDFHNLLPKIVDAIHSVETIEGNGGAGTIFKVTLVEGDRSRYSFHKIEAIDEANLIYNYSVFGGTGLSETWEKITFKTIVLEGPNGGSIRNTRVKYLTKGDGEINEEVFKNDKIRADGLVKFLEGYLLENPDYK* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0642 158 PANTHER PATHOGENESIS-RELATED PROTEIN 10 1 157 - -
Lan4g0642 158 SUPERFAMILY Bet v1-like 2 157 - -
Lan4g0642 158 CDD Bet_v1-like 2 151 - -
Lan4g0642 158 Gene3D - 2 158 IPR023393 -
Lan4g0642 158 PANTHER - 1 157 - -
Lan4g0642 158 PRINTS Major pollen allergen Bet V1 signature 3 23 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Lan4g0642 158 PRINTS Major pollen allergen Bet V1 signature 26 36 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Lan4g0642 158 PRINTS Major pollen allergen Bet V1 signature 49 58 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Lan4g0642 158 PRINTS Major pollen allergen Bet V1 signature 65 84 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Lan4g0642 158 PRINTS Major pollen allergen Bet V1 signature 84 97 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Lan4g0642 158 PRINTS Major pollen allergen Bet V1 signature 109 125 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Lan4g0642 158 PRINTS Major pollen allergen Bet V1 signature 143 153 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Lan4g0642 158 Pfam Pathogenesis-related protein Bet v 1 family 2 153 IPR000916 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0642 Lan-Chr4 8741075 8742274 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0642 - - adu:107483504 206.453