Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0224 ATGGAGAAAGCAAGCACTAAATCTTCTTTGAAGTTTGTGATGAATGCTTCAAATTCTGCAACTCGATGGAACAACACTAATTCTAAAGGAATGATAAAAGTTGAACTCAAAGACAAGTACCATGACAAGACTAAGGCTTCACCAAAGTCTCCCCCAAGAGAAAATACTAAACCACAAGAGTTCAAACTCCACACTCAAGAAAGAGCAGTGAAACGTGCAATGTTCAACTATGCTGTCACAACAAAATTTTATCTCATGGAGCTGCAAAAGAAAAGAGAGGAGAAGTTGATAAAGATGATTGAAGAGGAAGAGACTCGTTTGCTAAGGAAGGAAATGGTTCCAAGAGCTCAATTGATGCCTTATTTTGATAAGCCATTCTCCCCACAAAGATCAAGCAAGACAGTTCCAAAAGAATCATGTATCCACATGATGAGTAGCAAGTGTTGGAGATGCACCTCTAGCAATGAATTCTACAACCTGCACAACTATGGTCAACAGGCTCTTAACCCAATTAAGTAG 519 0.3892 MEKASTKSSLKFVMNASNSATRWNNTNSKGMIKVELKDKYHDKTKASPKSPPRENTKPQEFKLHTQERAVKRAMFNYAVTTKFYLMELQKKREEKLIKMIEEEETRLLRKEMVPRAQLMPYFDKPFSPQRSSKTVPKESCIHMMSSKCWRCTSSNEFYNLHNYGQQALNPIK* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0224 172 MobiDBLite consensus disorder prediction 16 31 - -
Lan4g0224 172 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY 1 164 - -
Lan4g0224 172 Coils Coil 85 110 - -
Lan4g0224 172 PANTHER TARGETING PROTEIN FOR XKLP2 1 164 IPR009675 GO:0005819|GO:0005874|GO:0032147|GO:0060236
Lan4g0224 172 MobiDBLite consensus disorder prediction 32 60 - -
Lan4g0224 172 MobiDBLite consensus disorder prediction 16 60 - -
Lan4g0224 172 Pfam Targeting protein for Xklp2 (TPX2) domain 61 133 IPR027329 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0224 Lan-Chr4 3700745 3703420 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0224 - - mtr:MTR_3g064800 261.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0224 4 3700745 3703420 Lan16g0595 16 7248051 7250360 LSH