Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0189 ATGGATGTAGTGAGGGGAGTTATATTGGATGGATCAGTACTCTTTGCTGAAGGTGATGATGATACAAATGTATCTTTTCTACGGCCAGGAGCTGAGTCTATTATCCGAACACTCTTCCTGTCCAGAATCCATTTAGGAATTTGTCATGGCATGGACCTTCCTGCTGACAAGGTGAGCATTCTCAAAAGAATCGCAAGTTCGTATTCACTTGATTGTTTTATCTTAAATGATCCCGTAAGTGAGGTTTTGCCTCCATGGAGCAATACTGATGACAGTATTGTTTATCTGGTTTCTAACAAGAAAGAGTTCTTACCTAAAGTAAGCAGCTATGGTTGGCTGATTGTTGTTCTGAAAGTTGGAGGTGGAAATTCATTTGACACTCCAAATATGCTTCAGATTGAAAATTTAGAAGAGTTGCCGTTGACTATATGCTGCTTAAATAAAAAGTCAATTAAAAATGCCGTGACCGTGGGTTATATAATGAAGTCTTCTCGTGTGGAAGATTTTGCGAAGCGGGGTGCATTCCCTTTGTATTGTACTCAAAATGGGCTAATGTTCGTGCCTCTCACTTCGGTGTTACCTTTATCATCTCAACTAAAGGATGTTGACGTAGTTCTCCATAAAGCCACTGATGAAATATTATCTATTGAAGAGAACAAACTTACATTTACTCAGAACATGCAAGAACTACAAAGATATTTGGAAGATCACAAGGATTTCTGTGTGATTGATCCACTGAGTAACATTTATCCTTTATTGGATCGGCTAGAAATTCAACAAGTTCTACTTGGCTTGGTAGAACTGAACGCTGAAGGTAGCTACTTGATCAGAGGTGCTCACTTTCTGAAAGTTGACAATTTCGATGAATTTAACTTAGCGACTAGGTTAGCCGAAGCTAGATTGTCTCTTCCATGTATAGTAAAACCCAAAGTTGCTTGTGGTGTCAGTGATGCACATAAGATGGCAATTGTCTTCAGAGTTGATGATTTTAAGAATTTAAGTGTTCCACTCCCTGCTGTTATTCAGGAATATGTGGATCATTCATCCACTTTGTACAAATTTTATGTCTTGGGCGAGGAAATTTTCTATGCCGTCAAGAAGTCGATACCAAATGCTGATATTTTGATGAAATCGTCAAACGGTGATGACCTCAAACCTCTATTGTTTGATAGCTTAAAATCTCTACCCACTGCTGACAGCATTCAGGATTACGGTGCCAATAATAGTAACACGACAAGTAATGAGTCTATTGACCTTAAGCTGGTTATAGATGCTGCACATTGGCTTAGGAAAAAGCTTCAACTTACCATCTTTGGTTTTGATGTTGTAATTCAGGAAGGTACTCATGACCATGTAATTGTAGATGTAAACTATCTGCCATCATTTAAGGAAGTACCTGATGACATCTCAATACCCGCCTTCTGGGAAGCCATTAGAAATAAGTTTGACAGCAGAGCGGGCTAA 1464 0.3887 MDVVRGVILDGSVLFAEGDDDTNVSFLRPGAESIIRTLFLSRIHLGICHGMDLPADKVSILKRIASSYSLDCFILNDPVSEVLPPWSNTDDSIVYLVSNKKEFLPKVSSYGWLIVVLKVGGGNSFDTPNMLQIENLEELPLTICCLNKKSIKNAVTVGYIMKSSRVEDFAKRGAFPLYCTQNGLMFVPLTSVLPLSSQLKDVDVVLHKATDEILSIEENKLTFTQNMQELQRYLEDHKDFCVIDPLSNIYPLLDRLEIQQVLLGLVELNAEGSYLIRGAHFLKVDNFDEFNLATRLAEARLSLPCIVKPKVACGVSDAHKMAIVFRVDDFKNLSVPLPAVIQEYVDHSSTLYKFYVLGEEIFYAVKKSIPNADILMKSSNGDDLKPLLFDSLKSLPTADSIQDYGANNSNTTSNESIDLKLVIDAAHWLRKKLQLTIFGFDVVIQEGTHDHVIVDVNYLPSFKEVPDDISIPAFWEAIRNKFDSRAG* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0189 487 Gene3D - 285 384 - -
Lan4g0189 487 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 297 465 - -
Lan4g0189 487 Gene3D - 145 270 - -
Lan4g0189 487 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain 290 467 IPR040464 -
Lan4g0189 487 PIRSF ITPK_unchar_domain 1 487 IPR008656 GO:0000287|GO:0005524|GO:0032957|GO:0047325|GO:0052725|GO:0052726
Lan4g0189 487 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain 157 249 IPR041429 -
Lan4g0189 487 PANTHER INOSITOL-TETRAKISPHOSPHATE 1-KINASE 21 485 IPR008656 GO:0000287|GO:0005524|GO:0032957|GO:0047325|GO:0052725|GO:0052726
Lan4g0189 487 PANTHER INOSITOL 1,3,4-TRISPHOSPHATE 5/6-KINASE 4 21 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0189 Lan-Chr4 3170421 3173756 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0189 K01765 - gmx:100810742 779.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0189 4 3170421 3173756 Lan16g0633 16 8084200 8087286 LSH