Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0177 ATGAGTGCATATAATATGCTGGATATTGTTATGAAAGATATACTTCAAGTGGTTACACCCGTACAAGAAGATTGGGAAGTACGTTTTGCGATTATTAATGATTTGCGAAGAGTTGTTGAATCTGTGGCAAGCCTGAGAGGAGCAACTGTTGAGCCATATGGGTCATTTGTGTCTAACCTCTTCACACGGTGGGGTGACTTGGATATTTCAGTTGAGTTATTAAATGGTTCACATATTCCATCCACCGGGAGAAAACAAAAACAAGTGCTATTGGGGGATCTTTTAAAAGCTCTGAGAAAGAAAGGTGGATGGAATAGTTTGCAGTTCATCTTCAATGCACGAATTCCCATTTTAAAACTCAAGAACAACCGTCAGAGTATATCTTGTGATATTTCAATGAATAACCTGGAGGCCCAAATGAAATCCAAGATTTTGTTTTGGATTAACAGGATAGATGGCCGCTTTCGTGATATGGTTTTACTGGTCAAGGAATGGGCTAAAGCACATAAAATTAATGATTCTAAAGCTGGAACTTTCAACTCTTATTCCCTGAGTTTACTTGTGATCTTTCACTTTCAGACATGTGTTCCTGCAATTTTGCCACCCCTTAATGTGATATACCCTGGCAATATGGTTGATGATCTTATAGGTGTTAAAGTGGACGCAGAGAATCATATTGCGGAAACATTTGATGCTAATATAAACCGGTTCATATCAGACAAGTCCAGACCAATTAACAGAAAATCTGTGCCTGAACTTTTTGTGGAATTCGTAAGAAAGTTTGCTCAGATGAGTTCATGGGCCTCAGAGCTGGGAATTTCCCCATATAATGGACAATGGGAACAGATAAAGAACAACATGAGATGGCTGCCCAAGACTTATGCAGTATTTGTTGAGGATCCTTTTGAGCAGCCACAAAATACTGCACGGTCGGTCAACCAAGGAAAACTGGAGAAGATAACCAATGCATTTCTGGATACATACAGCTTACTTACCTCAAAGAATCTGAATCAAAGTTCTATCCTGACCTCCTTAGCACCACCAGAGGTGGCAATGATTATTGCTAAACCTGTTATCCCAGATTACAATGGTGGTTACTACCATCACCGAACTCCGCCTCAGGTGCAGAGAGCCCTGCTCCCGCACCCACACCCACACCCACACCCGCGCCCATACCCACAATTGCGTCCACAGGAGCAGCCACCACCATCGCGTCGTTCTCAAAATGGCAGTCGAGGGACAAGCTCCAATGGTTCGACTTCAAGGGGACCTGTGCAGTCACAACAAGGCCAGCAAATATGGAGGCAAAAGACTCAATAG 1320 0.4258 MSAYNMLDIVMKDILQVVTPVQEDWEVRFAIINDLRRVVESVASLRGATVEPYGSFVSNLFTRWGDLDISVELLNGSHIPSTGRKQKQVLLGDLLKALRKKGGWNSLQFIFNARIPILKLKNNRQSISCDISMNNLEAQMKSKILFWINRIDGRFRDMVLLVKEWAKAHKINDSKAGTFNSYSLSLLVIFHFQTCVPAILPPLNVIYPGNMVDDLIGVKVDAENHIAETFDANINRFISDKSRPINRKSVPELFVEFVRKFAQMSSWASELGISPYNGQWEQIKNNMRWLPKTYAVFVEDPFEQPQNTARSVNQGKLEKITNAFLDTYSLLTSKNLNQSSILTSLAPPEVAMIIAKPVIPDYNGGYYHHRTPPQVQRALLPHPHPHPHPRPYPQLRPQEQPPPSRRSQNGSRGTSSNGSTSRGPVQSQQGQQIWRQKTQ* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0177 439 PANTHER POLY A POLYMERASE CID PAP -RELATED 1 414 - -
Lan4g0177 439 Gene3D Beta Polymerase, domain 2 30 151 IPR043519 -
Lan4g0177 439 PANTHER PROTEIN HESO1 1 414 - -
Lan4g0177 439 Gene3D - 152 328 - -
Lan4g0177 439 MobiDBLite consensus disorder prediction 377 439 - -
Lan4g0177 439 MobiDBLite consensus disorder prediction 378 400 - -
Lan4g0177 439 CDD NT_PAP_TUTase 27 136 - -
Lan4g0177 439 MobiDBLite consensus disorder prediction 401 439 - -
Lan4g0177 439 SUPERFAMILY Nucleotidyltransferase 4 147 IPR043519 -
Lan4g0177 439 SUPERFAMILY PAP/OAS1 substrate-binding domain 154 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0177 Lan-Chr4 2879838 2886947 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0177 - - ccaj:109788017 600.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0177 4 2879838 2886947 Lan16g0659 16 8663701 8670089 LSH