Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0113 ATGCAATTCTGTTCCTCAATCTGTTTAACAACCAAGGTTCCGGTTCGTGTGCAGTCACTGCACATGAACTCGACAACCGTGAACGACCCTAGTTTCATTGCAGCTGTGCCTATTCCTAAGTGGTCCCAGAAAACAATAGTTTTGCCTCCCCTGAAGCGTGGTTGTCATCTAATCACTTCTAAGATAGTGAAAGAAATTCAGCCAGACTTATCTGGGTTCCAATGTGGCCTAGCTCATCTCTTTTTGCATCACACAAGTGCTTCACTTACCATCAATGAGAATTATGACTACGATGTTCGAGATGATACCGAGACATTCCTTAATAGGATAGTTCCGGAGGGGCCATCTGCACCTTGGAAGCATACTCTAGAGGGGCCAGATGACATGCCGGCGCATATTAAATCATCGATGTTTGGTTGTGCACTCACGATACCCATATCAACAGGAAAGCTTAACATGGGGACATGGCAGGGTATATGGCTTTGTGAGCATAGGGATTATCCTACCGCACGCACACTAGTGGTCACTCTTAATGGAATATGA 543 0.453 MQFCSSICLTTKVPVRVQSLHMNSTTVNDPSFIAAVPIPKWSQKTIVLPPLKRGCHLITSKIVKEIQPDLSGFQCGLAHLFLHHTSASLTINENYDYDVRDDTETFLNRIVPEGPSAPWKHTLEGPDDMPAHIKSSMFGCALTIPISTGKLNMGTWQGIWLCEHRDYPTARTLVVTLNGI* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0113 180 TIGRFAM TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 52 179 IPR001602 -
Lan4g0113 180 PANTHER - 24 180 - -
Lan4g0113 180 PANTHER UNCHARACTERIZED PROTEIN YJBQ-RELATED 24 180 IPR001602 -
Lan4g0113 180 Pfam Uncharacterised protein family UPF0047 58 176 IPR001602 -
Lan4g0113 180 Gene3D - 37 179 IPR035917 -
Lan4g0113 180 SUPERFAMILY YjbQ-like 41 179 IPR035917 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0113 Lan-Chr4 1722677 1725207 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0113 - - gmx:100500593 321.627